RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 KCNK16Q96T55 309 aa16.51■□□□□ 0.23
SCAP-209ENST00000465628 TTLL2Q9BWV7 592 aa16.51■□□□□ 0.23
SCAP-209ENST00000465628 LMAN1LQ9HAT1 526 aa16.51■□□□□ 0.23
SCAP-209ENST00000465628 TMEM30AQ9NV96 361 aa16.51■□□□□ 0.23
SCAP-209ENST00000465628 RAB20Q9NX57 234 aa16.51■□□□□ 0.23
SCAP-209ENST00000465628 DUS2Q9NX74 493 aaKnown RBP16.51■□□□□ 0.23
SCAP-209ENST00000465628 ARSAP15289 507 aa16.5■□□□□ 0.23
SCAP-209ENST00000465628 NBL1P41271 181 aa16.5■□□□□ 0.23
SCAP-209ENST00000465628 RPS9P46781 194 aaKnown RBP16.5■□□□□ 0.23
SCAP-209ENST00000465628 CSTF1Q05048 431 aaKnown RBP16.5■□□□□ 0.23
SCAP-209ENST00000465628 INCA1Q0VD86 236 aa16.5■□□□□ 0.23
SCAP-209ENST00000465628 USP4Q13107 963 aa16.5■□□□□ 0.23
SCAP-209ENST00000465628 RUNX3Q13761 415 aa16.5■□□□□ 0.23
SCAP-209ENST00000465628 PPP2R5DQ14738 602 aa16.5■□□□□ 0.23
SCAP-209ENST00000465628 PDGFRLQ15198 375 aa16.5■□□□□ 0.23
SCAP-209ENST00000465628 ZNF77Q15935 545 aa16.5■□□□□ 0.23
SCAP-209ENST00000465628 SMPD4Q9NXE4 827 aa16.5■□□□□ 0.23
SCAP-209ENST00000465628 ARHGAP26Q9UNA1 814 aa16.5■□□□□ 0.23
SCAP-209ENST00000465628 WNT6Q9Y6F9 365 aa16.5■□□□□ 0.23
SCAP-209ENST00000465628 R4GN57 208 aa16.5■□□□□ 0.23
SCAP-209ENST00000465628 ZNF840PA6NDX5 716 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 SP9P0CG40 484 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 MBL2P11226 248 aaPredicted RBP16.49■□□□□ 0.23
SCAP-209ENST00000465628 CD44P16070 742 aaKnown RBP16.49■□□□□ 0.23
SCAP-209ENST00000465628 STX17P56962 302 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 AMPD2Q01433 879 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 MTAPQ13126 283 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 PAK1Q13153 545 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 CAMK4Q16566 473 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 CBWD6Q4V339 395 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 CBWD3Q5JTY5 395 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 CBWD5Q5RIA9 395 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 TTC39CQ8N584 583 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 SCAMP5Q8TAC9 235 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 SEMA4DQ92854 862 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 ATP2A3Q93084 1043 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 CLDN23Q96B33 292 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 CEP63Q96MT8 703 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 TWNKQ96RR1 684 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 CHRDQ9H2X0 955 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 METTL14Q9HCE5 456 aaKnown RBP16.49■□□□□ 0.23
SCAP-209ENST00000465628 GMIPQ9P107 970 aa16.49■□□□□ 0.23
SCAP-209ENST00000465628 CACNA1IQ9P0X4 2223 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 CILPO75339 1184 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 PFKLP17858 780 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 MLLT6P55198 1093 aaPredicted RBP16.48■□□□□ 0.23
SCAP-209ENST00000465628 YWHAEP62258 255 aaKnown RBP16.48■□□□□ 0.23
SCAP-209ENST00000465628 TXNDC11Q6PKC3 985 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 ZC3H3Q8IXZ2 948 aaKnown RBP16.48■□□□□ 0.23
SCAP-209ENST00000465628 CRYBG2Q8N1P7 616 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 RIN3Q8TB24 985 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 OSCP1Q8WVF1 389 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 EXOC4Q96A65 974 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 CYFIP2Q96F07 1278 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 ARID3AQ99856 593 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 HINFPQ9BQA5 517 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 IER2Q9BTL4 223 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 FBXO44Q9H4M3 255 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 HPS4Q9NQG7 708 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 RBM12Q9NTZ6 932 aaKnown RBP16.48■□□□□ 0.23
SCAP-209ENST00000465628 GCNT4Q9P109 453 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 CPQQ9Y646 472 aa16.48■□□□□ 0.23
SCAP-209ENST00000465628 SHISA7A6NL88 538 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 LEFTY2O00292 366 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 SCAMP3O14828 347 aaKnown RBP16.47■□□□□ 0.23
SCAP-209ENST00000465628 CCR3P51677 355 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 CETN1Q12798 172 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 GRSF1Q12849 480 aaKnown RBP eCLIP16.47■□□□□ 0.23
SCAP-209ENST00000465628 LRMPQ12912 555 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 MORC3Q14149 939 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 HECTD3Q5T447 861 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 TSSK4Q6SA08 328 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 PAQR9Q6ZVX9 377 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 DDX42Q86XP3 938 aaKnown RBP eCLIP16.47■□□□□ 0.23
SCAP-209ENST00000465628 OVCA2Q8WZ82 227 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 HEXIM2Q96MH2 286 aaKnown RBP16.47■□□□□ 0.23
SCAP-209ENST00000465628 SMOQ99835 787 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 FAM83CQ9BQN1 747 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 CISHQ9NSE2 258 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 FBXO4Q9UKT5 387 aa16.47■□□□□ 0.23
SCAP-209ENST00000465628 PRR23AA6NEV1 266 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 BEST1O76090 585 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 NFATC1O95644 943 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 CHRNB1P11230 501 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 SLC8A3P57103 927 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 SLC7A9P82251 487 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 NR1H3Q13133 447 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 DGKKQ5KSL6 1271 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 TTI2Q6NXR4 508 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 Q6ZS52 159 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 CREBRFQ8IUR6 639 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 ATRIPQ8WXE1 791 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 SLC35C1Q96A29 364 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 HNRNPABQ99729 332 aaKnown RBP16.46■□□□□ 0.23
SCAP-209ENST00000465628 ECT2Q9H8V3 914 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 TLR8Q9NR97 1041 aaKnown RBP16.46■□□□□ 0.23
SCAP-209ENST00000465628 CFAP97Q9P2B7 532 aa16.46■□□□□ 0.23
SCAP-209ENST00000465628 CHORDC1Q9UHD1 332 aaPredicted RBP16.46■□□□□ 0.23
SCAP-209ENST00000465628 ZFHX2Q9C0A1 2572 aaPredicted RBP16.45■□□□□ 0.22
SCAP-209ENST00000465628 PPP1R3GB7ZBB8 358 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms