RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 ABCB4P21439 1286 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 RRM1P23921 792 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 TKTP29401 623 aaKnown RBP9.32□□□□□ -0.92
UBA3-208ENST00000465627 LHX1P48742 406 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 SLC11A1P49279 550 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 DEFB103AP81534 67 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 FAM171BQ6P995 826 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 TMEM173Q86WV6 379 aaPredicted RBP9.32□□□□□ -0.92
UBA3-208ENST00000465627 RHOT2Q8IXI1 618 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 TMEM199Q8N511 208 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 TTC13Q8NBP0 860 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 B3GALNT2Q8NCR0 500 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 TMEM35BQ8NCS4 154 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 OR6B3Q8NGW1 331 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 KIF18AQ8NI77 898 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 STK32AQ8WU08 396 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 BCL7CQ8WUZ0 217 aaPredicted RBP9.32□□□□□ -0.92
UBA3-208ENST00000465627 CTNNBL1Q8WYA6 563 aaPredicted RBP9.32□□□□□ -0.92
UBA3-208ENST00000465627 HEXIM2Q96MH2 286 aaKnown RBP9.32□□□□□ -0.92
UBA3-208ENST00000465627 NOX5Q96PH1 765 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 CPXM1Q96SM3 734 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 HNRNPABQ99729 332 aaKnown RBP9.32□□□□□ -0.92
UBA3-208ENST00000465627 PRRX2Q99811 253 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 TLR10Q9BXR5 811 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 MRPL9Q9BYD2 267 aaKnown RBP9.32□□□□□ -0.92
UBA3-208ENST00000465627 TMEM30AQ9NV96 361 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 SEPT11Q9NVA2 429 aaKnown RBP9.32□□□□□ -0.92
UBA3-208ENST00000465627 UVRAGQ9P2Y5 699 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 TJP2Q9UDY2 1190 aa9.32□□□□□ -0.92
UBA3-208ENST00000465627 TULP2O00295 520 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 LCE2BO14633 110 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 PALMO75781 387 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 ATP1A1P05023 1023 aaKnown RBP9.31□□□□□ -0.92
UBA3-208ENST00000465627 PDGFRBP09619 1106 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 SETSIPP0DME0 302 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 ODC1P11926 461 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 CCDC130P13994 396 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 FGFR3P22607 806 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 NSFP46459 744 aaKnown RBP9.31□□□□□ -0.92
UBA3-208ENST00000465627 VCPP55072 806 aaKnown RBP9.31□□□□□ -0.92
UBA3-208ENST00000465627 HTRA4P83105 476 aaPredicted RBP9.31□□□□□ -0.92
UBA3-208ENST00000465627 PLCB3Q01970 1234 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 PDCLQ13371 301 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 MAMLD1Q13495 774 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 GOLGA7BQ2TAP0 167 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 PAN2Q504Q3 1202 aaKnown RBP9.31□□□□□ -0.92
UBA3-208ENST00000465627 C2CD6Q53TS8 623 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 MEI1Q5TIA1 1274 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 MMS22LQ6ZRQ5 1243 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 TMEM110Q86TL2 294 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 NT5DC3Q86UY8 548 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 XYLT1Q86Y38 959 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 LRRC43Q8N309 656 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 ANKRD52Q8NB46 1076 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 OR10T2Q8NGX3 314 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 HASPINQ8TF76 798 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 CD101Q93033 1021 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 ZNF653Q96CK0 615 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 MCRS1Q96EZ8 462 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 TRIM11Q96F44 468 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 TNIP3Q96KP6 325 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 CALR3Q96L12 384 aaKnown RBP9.31□□□□□ -0.92
UBA3-208ENST00000465627 ACBD6Q9BR61 282 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 PRR14Q9BWN1 585 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 VN1R3Q9BXE9 311 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 B3GNT5Q9BYG0 378 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 GPR62Q9BZJ7 368 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 TRIM7Q9C029 511 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 SNX25Q9H3E2 840 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 DDX43Q9NXZ2 648 aaKnown RBP9.31□□□□□ -0.92
UBA3-208ENST00000465627 ADAM22Q9P0K1 906 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 CNOT8Q9UFF9 292 aaKnown RBP9.31□□□□□ -0.92
UBA3-208ENST00000465627 CHORDC1Q9UHD1 332 aaPredicted RBP9.31□□□□□ -0.92
UBA3-208ENST00000465627 PUF60Q9UHX1 559 aaKnown RBP9.31□□□□□ -0.92
UBA3-208ENST00000465627 DSEQ9UL01 958 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 CDH9Q9ULB4 789 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 JRKLQ9Y4A0 524 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 TIMM13Q9Y5L4 95 aaPredicted RBP9.31□□□□□ -0.92
UBA3-208ENST00000465627 BPTFQ12830 3046 aa9.31□□□□□ -0.92
UBA3-208ENST00000465627 SPEGQ15772 3267 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 FAM170AA1A519 330 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 MYBPHLA2RUH7 354 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 TMEM191CA6NGB0 347 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 TBKBP1A7MCY6 615 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 M0QYV0 167 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 SYN3O14994 580 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 ERBB2P04626 1255 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 PRLRP16471 622 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 IBSPP21815 317 aaPredicted RBP9.3□□□□□ -0.92
UBA3-208ENST00000465627 ACAT1P24752 427 aaKnown RBP9.3□□□□□ -0.92
UBA3-208ENST00000465627 COPS2P61201 443 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 PSMC1P62191 440 aaKnown RBP9.3□□□□□ -0.92
UBA3-208ENST00000465627 PDE4CQ08493 712 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 ZNF252P-AS1Q0IIN9 211 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 C11orf63Q6NUN7 778 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 PMF1Q6P1K2 205 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 DSTYKQ6XUX3 929 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.3□□□□□ -0.92
UBA3-208ENST00000465627 ZNF365Q70YC5 407 aa9.3□□□□□ -0.92
UBA3-208ENST00000465627 LRRTM3Q86VH5 581 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms