RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SUMO2P61956 95 aaKnown RBP6.31□□□□□ -1.4
SMC4-205ENST00000465563 CTBP1Q13363 440 aa6.31□□□□□ -1.4
SMC4-205ENST00000465563 MLC1Q15049 377 aa6.31□□□□□ -1.4
SMC4-205ENST00000465563 LRRC41Q15345 812 aa6.31□□□□□ -1.4
SMC4-205ENST00000465563 MEX3CQ5U5Q3 659 aaKnown RBP6.31□□□□□ -1.4
SMC4-205ENST00000465563 SHC4Q6S5L8 630 aa6.31□□□□□ -1.4
SMC4-205ENST00000465563 BCDIN3DQ7Z5W3 292 aaKnown RBP6.31□□□□□ -1.4
SMC4-205ENST00000465563 DAAM2Q86T65 1068 aa6.31□□□□□ -1.4
SMC4-205ENST00000465563 OR6B3Q8NGW1 331 aa6.31□□□□□ -1.4
SMC4-205ENST00000465563 C16orf52Q8NHV5 167 aa6.31□□□□□ -1.4
SMC4-205ENST00000465563 CUL5Q93034 780 aa6.31□□□□□ -1.4
SMC4-205ENST00000465563 CCDC17Q96LX7 622 aa6.31□□□□□ -1.4
SMC4-205ENST00000465563 EFHD1Q9BUP0 239 aa6.31□□□□□ -1.4
SMC4-205ENST00000465563 MS4A7Q9GZW8 240 aaPredicted RBP6.31□□□□□ -1.4
SMC4-205ENST00000465563 A0A1W2PPL8 197 aa6.3□□□□□ -1.4
SMC4-205ENST00000465563 MYMKA6NI61 221 aa6.3□□□□□ -1.4
SMC4-205ENST00000465563 H3BML4 177 aa6.3□□□□□ -1.4
SMC4-205ENST00000465563 INSIG1O15503 277 aa6.3□□□□□ -1.4
SMC4-205ENST00000465563 ABLIM3O94929 683 aa6.3□□□□□ -1.4
SMC4-205ENST00000465563 A1BGP04217 495 aa6.3□□□□□ -1.4
SMC4-205ENST00000465563 SNHG28P0DPA3 235 aa6.3□□□□□ -1.4
SMC4-205ENST00000465563 NPR1P16066 1061 aa6.3□□□□□ -1.4
SMC4-205ENST00000465563 GKP32189 559 aa6.3□□□□□ -1.4
SMC4-205ENST00000465563 CERCAMQ5T4B2 595 aa6.3□□□□□ -1.4
SMC4-205ENST00000465563 RAPGEF4Q8WZA2 1011 aa6.3□□□□□ -1.4
SMC4-205ENST00000465563 COQ8BQ96D53 544 aa6.3□□□□□ -1.4
SMC4-205ENST00000465563 GBA2Q9HCG7 927 aaPredicted RBP6.3□□□□□ -1.4
SMC4-205ENST00000465563 ASIC5Q9NY37 505 aa6.3□□□□□ -1.4
SMC4-205ENST00000465563 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.3□□□□□ -1.4
SMC4-205ENST00000465563 CES2O00748 559 aa6.29□□□□□ -1.4
SMC4-205ENST00000465563 UBXN7O94888 489 aa6.29□□□□□ -1.4
SMC4-205ENST00000465563 PHKG2P15735 406 aa6.29□□□□□ -1.4
SMC4-205ENST00000465563 PSG6Q00889 435 aa6.29□□□□□ -1.4
SMC4-205ENST00000465563 GHRHRQ02643 423 aa6.29□□□□□ -1.4
SMC4-205ENST00000465563 CCNIQ14094 377 aa6.29□□□□□ -1.4
SMC4-205ENST00000465563 C4orf46Q504U0 113 aa6.29□□□□□ -1.4
SMC4-205ENST00000465563 RAB11FIP4Q86YS3 637 aa6.29□□□□□ -1.4
SMC4-205ENST00000465563 SPARTQ8N0X7 666 aa6.29□□□□□ -1.4
SMC4-205ENST00000465563 MPP5Q8N3R9 675 aa6.29□□□□□ -1.4
SMC4-205ENST00000465563 BRINP2Q9C0B6 783 aa6.29□□□□□ -1.4
SMC4-205ENST00000465563 GABBR1Q9UBS5 961 aa6.29□□□□□ -1.4
SMC4-205ENST00000465563 PNMA8BQ9ULN7 279 aaPredicted RBP6.29□□□□□ -1.4
SMC4-205ENST00000465563 TBC1D4O60343 1298 aa6.28□□□□□ -1.4
SMC4-205ENST00000465563 PMPCBO75439 489 aa6.28□□□□□ -1.4
SMC4-205ENST00000465563 MT-CO3P00414 261 aa6.28□□□□□ -1.4
SMC4-205ENST00000465563 HSPA6P17066 643 aa6.28□□□□□ -1.4
SMC4-205ENST00000465563 BCAT1P54687 386 aa6.28□□□□□ -1.4
SMC4-205ENST00000465563 SLC13A2Q13183 592 aa6.28□□□□□ -1.4
SMC4-205ENST00000465563 PTPROQ16827 1216 aa6.28□□□□□ -1.4
SMC4-205ENST00000465563 PTCHD3Q3KNS1 767 aa6.28□□□□□ -1.4
SMC4-205ENST00000465563 NRACQ8N912 160 aa6.28□□□□□ -1.4
SMC4-205ENST00000465563 ZNF398Q8TD17 642 aa6.28□□□□□ -1.4
SMC4-205ENST00000465563 DPH1Q9BZG8 443 aa6.28□□□□□ -1.4
SMC4-205ENST00000465563 NMRK2Q9NPI5 230 aa6.28□□□□□ -1.4
SMC4-205ENST00000465563 M0R3H8 397 aa6.27□□□□□ -1.41
SMC4-205ENST00000465563 RNF8O76064 485 aa6.27□□□□□ -1.41
SMC4-205ENST00000465563 TMEM191BP0C7N4 346 aa6.27□□□□□ -1.41
SMC4-205ENST00000465563 KITP10721 976 aa6.27□□□□□ -1.41
SMC4-205ENST00000465563 IBSPP21815 317 aaPredicted RBP6.27□□□□□ -1.41
SMC4-205ENST00000465563 PRKAR1BP31321 381 aa6.27□□□□□ -1.41
SMC4-205ENST00000465563 RAB32Q13637 225 aa6.27□□□□□ -1.41
SMC4-205ENST00000465563 PTCHD4Q6ZW05 846 aa6.27□□□□□ -1.41
SMC4-205ENST00000465563 SAMD14Q8IZD0 417 aaPredicted RBP6.27□□□□□ -1.41
SMC4-205ENST00000465563 NT5C1BQ96P26 610 aa6.27□□□□□ -1.41
SMC4-205ENST00000465563 PI4KBQ9UBF8 816 aa6.27□□□□□ -1.41
SMC4-205ENST00000465563 USP22Q9UPT9 525 aa6.27□□□□□ -1.41
SMC4-205ENST00000465563 DRG1Q9Y295 367 aaKnown RBP6.27□□□□□ -1.41
SMC4-205ENST00000465563 TKTP29401 623 aaKnown RBP6.26□□□□□ -1.41
SMC4-205ENST00000465563 COPB1P53618 953 aaKnown RBP6.26□□□□□ -1.41
SMC4-205ENST00000465563 LMAN2Q12907 356 aa6.26□□□□□ -1.41
SMC4-205ENST00000465563 RAPGEF1Q13905 1077 aa6.26□□□□□ -1.41
SMC4-205ENST00000465563 RBMS2Q15434 407 aaKnown RBP6.26□□□□□ -1.41
SMC4-205ENST00000465563 TWIST1Q15672 202 aa6.26□□□□□ -1.41
SMC4-205ENST00000465563 TMEM63BQ5T3F8 832 aa6.26□□□□□ -1.41
SMC4-205ENST00000465563 C10orf25Q5T742 122 aa6.26□□□□□ -1.41
SMC4-205ENST00000465563 DENND2CQ68D51 928 aa6.26□□□□□ -1.41
SMC4-205ENST00000465563 IRF2BP2Q7Z5L9 587 aa6.26□□□□□ -1.41
SMC4-205ENST00000465563 OSR1Q8TAX0 266 aaPredicted RBP6.26□□□□□ -1.41
SMC4-205ENST00000465563 AIFM3Q96NN9 605 aa6.26□□□□□ -1.41
SMC4-205ENST00000465563 RHOBTB2Q9BYZ6 727 aa6.26□□□□□ -1.41
SMC4-205ENST00000465563 EBF3Q9H4W6 596 aa6.26□□□□□ -1.41
SMC4-205ENST00000465563 ZMAT3Q9HA38 289 aaKnown RBP6.26□□□□□ -1.41
SMC4-205ENST00000465563 SNX15Q9NRS6 342 aa6.26□□□□□ -1.41
SMC4-205ENST00000465563 MTMR4Q9NYA4 1195 aa6.26□□□□□ -1.41
SMC4-205ENST00000465563 TMEM233B4DJY2 109 aa6.25□□□□□ -1.41
SMC4-205ENST00000465563 ADAM10O14672 748 aa6.25□□□□□ -1.41
SMC4-205ENST00000465563 TMEM65Q6PI78 240 aa6.25□□□□□ -1.41
SMC4-205ENST00000465563 CRELD2Q6UXH1 353 aaPredicted RBP6.25□□□□□ -1.41
SMC4-205ENST00000465563 ZDHHC17Q8IUH5 632 aa6.25□□□□□ -1.41
SMC4-205ENST00000465563 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.25□□□□□ -1.41
SMC4-205ENST00000465563 PPP1R35Q8TAP8 253 aa6.25□□□□□ -1.41
SMC4-205ENST00000465563 SLC35G2Q8TBE7 412 aa6.25□□□□□ -1.41
SMC4-205ENST00000465563 DNAJB14Q8TBM8 379 aa6.25□□□□□ -1.41
SMC4-205ENST00000465563 PNISRQ8TF01 805 aaKnown RBP6.25□□□□□ -1.41
SMC4-205ENST00000465563 NSMCE1Q8WV22 266 aa6.25□□□□□ -1.41
SMC4-205ENST00000465563 ZNF518BQ9C0D4 1074 aa6.25□□□□□ -1.41
SMC4-205ENST00000465563 LPAR3Q9UBY5 353 aa6.25□□□□□ -1.41
SMC4-205ENST00000465563 PAXBP1Q9Y5B6 917 aa6.25□□□□□ -1.41
SMC4-205ENST00000465563 E2F8A0AVK6 867 aa6.24□□□□□ -1.41
SMC4-205ENST00000465563 H3BNC9 293 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms