RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 GRIN2CQ14957 1233 aa18.14■□□□□ 0.49
PTPRU-206ENST00000465525 LIN9Q5TKA1 542 aa18.14■□□□□ 0.49
PTPRU-206ENST00000465525 SCUBE3Q8IX30 993 aa18.14■□□□□ 0.49
PTPRU-206ENST00000465525 ZNF461Q8TAF7 563 aa18.14■□□□□ 0.49
PTPRU-206ENST00000465525 SPPL2BQ8TCT7 592 aa18.14■□□□□ 0.49
PTPRU-206ENST00000465525 IPO4Q8TEX9 1081 aaKnown RBP18.14■□□□□ 0.49
PTPRU-206ENST00000465525 CLEC4CQ8WTT0 213 aa18.14■□□□□ 0.49
PTPRU-206ENST00000465525 FUBP3Q96I24 572 aaKnown RBP eCLIP18.14■□□□□ 0.49
PTPRU-206ENST00000465525 PRDM12Q9H4Q4 367 aa18.14■□□□□ 0.49
PTPRU-206ENST00000465525 LMCD1Q9NZU5 365 aa18.14■□□□□ 0.49
PTPRU-206ENST00000465525 GREB1Q4ZG55 1949 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 BUB1O43683 1085 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 ABLIM3O94929 683 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 CALB1P05937 261 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 ADH1AP07327 375 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 HAPLN1P10915 354 aaPredicted RBP18.13■□□□□ 0.49
PTPRU-206ENST00000465525 MSNP26038 577 aaKnown RBP18.13■□□□□ 0.49
PTPRU-206ENST00000465525 KLRC2P26717 231 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 ARHGAP29Q52LW3 1261 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 OR6B2Q6IFH4 312 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 FAM183BPQ6ZVS7 135 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 XYLT1Q86Y38 959 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 MSANTD4Q8NCY6 345 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 PIWIL1Q96J94 861 aaKnown RBP18.13■□□□□ 0.49
PTPRU-206ENST00000465525 IRX2Q9BZI1 471 aaPredicted RBP18.13■□□□□ 0.49
PTPRU-206ENST00000465525 CYP4F11Q9HBI6 524 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 ABCB6Q9NP58 842 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 OSGEPQ9NPF4 335 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 AFF4Q9UHB7 1163 aaKnown RBP18.13■□□□□ 0.49
PTPRU-206ENST00000465525 INTUQ9ULD6 942 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 MYO9BQ13459 2157 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 NCANO14594 1321 aa18.13■□□□□ 0.49
PTPRU-206ENST00000465525 ZNF638Q14966 1978 aaKnown RBP18.13■□□□□ 0.49
PTPRU-206ENST00000465525 MAGEA11P43364 429 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 TKTL1P51854 596 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 SCAMP5Q8TAC9 235 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 SLC35G2Q8TBE7 412 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 GIPC2Q8TF65 315 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 STK32AQ8WU08 396 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 TRIM11Q96F44 468 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 NUP85Q9BW27 656 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 LRRC4Q9HBW1 653 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 CTTNBP2NLQ9P2B4 639 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 COG5Q9UP83 839 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 PAPSS1O43252 624 aaPredicted RBP18.12■□□□□ 0.49
PTPRU-206ENST00000465525 TGM5O43548 720 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 MOCS3O95396 460 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 C1RP00736 705 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 CYP1A2P05177 515 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 ATF2P15336 505 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 NOP2P46087 812 aaKnown RBP18.12■□□□□ 0.49
PTPRU-206ENST00000465525 GABRB2P47870 512 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 NAP1L1P55209 391 aaKnown RBP18.12■□□□□ 0.49
PTPRU-206ENST00000465525 TPGS2Q68CL5 300 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 PPP1R2P3Q6NXS1 205 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 VSTM1Q6UX27 236 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 TMEM110Q86TL2 294 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 RBM23Q86U06 439 aaKnown RBP18.12■□□□□ 0.49
PTPRU-206ENST00000465525 C2orf15Q8WU43 125 aaKnown RBP18.12■□□□□ 0.49
PTPRU-206ENST00000465525 VCPIP1Q96JH7 1222 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 TRIM7Q9C029 511 aa18.12■□□□□ 0.49
PTPRU-206ENST00000465525 MTCL1Q9Y4B5 1905 aaKnown RBP18.11■□□□□ 0.49
PTPRU-206ENST00000465525 PRRG1O14668 218 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 PER2O15055 1255 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 KRT86O43790 486 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 GRAP2O75791 330 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 MYBL1P10243 752 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 ATF6P18850 670 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 RPL34P49207 117 aaKnown RBP18.11■□□□□ 0.49
PTPRU-206ENST00000465525 MTMR3Q13615 1198 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 TAF5Q15542 800 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 DNAJC24Q6P3W2 148 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 ADGRD2Q7Z7M1 963 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 SIX6OS1Q8N1H7 587 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 KCTD13Q8WZ19 329 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 RFFLQ8WZ73 363 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 PPP2R3CQ969Q6 453 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 BTBD6Q96KE9 485 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 HSFY1Q96LI6 401 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 ULBP1Q9BZM6 244 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 TSGA10Q9BZW7 698 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 METTL5Q9NRN9 209 aaKnown RBP18.11■□□□□ 0.49
PTPRU-206ENST00000465525 KCND1Q9NSA2 647 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 STRIP2Q9ULQ0 834 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 MAFFQ9ULX9 164 aa18.11■□□□□ 0.49
PTPRU-206ENST00000465525 ESPNB1AK53 854 aa18.1■□□□□ 0.49
PTPRU-206ENST00000465525 TRIM66O15016 1216 aa18.1■□□□□ 0.49
PTPRU-206ENST00000465525 CCP110O43303 1012 aa18.1■□□□□ 0.49
PTPRU-206ENST00000465525 USP17L7P0C7H9 530 aa18.1■□□□□ 0.49
PTPRU-206ENST00000465525 POU3F3P20264 500 aaPredicted RBP18.1■□□□□ 0.49
PTPRU-206ENST00000465525 ACADSBP45954 432 aa18.1■□□□□ 0.49
PTPRU-206ENST00000465525 SLC5A3P53794 718 aa18.1■□□□□ 0.49
PTPRU-206ENST00000465525 RNASE9P60153 205 aaKnown RBP18.1■□□□□ 0.49
PTPRU-206ENST00000465525 MAMLD1Q13495 774 aa18.1■□□□□ 0.49
PTPRU-206ENST00000465525 FAM102AQ5T9C2 384 aaPredicted RBP18.1■□□□□ 0.49
PTPRU-206ENST00000465525 TXLNBQ8N3L3 684 aa18.1■□□□□ 0.49
PTPRU-206ENST00000465525 C8orf48Q96LL4 319 aa18.1■□□□□ 0.49
PTPRU-206ENST00000465525 FAM161BQ96MY7 647 aa18.1■□□□□ 0.49
PTPRU-206ENST00000465525 TLE6Q9H808 572 aa18.1■□□□□ 0.49
PTPRU-206ENST00000465525 AVENQ9NQS1 362 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms