RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 LRRTM3Q86VH5 581 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 METTL23Q86XA0 190 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 THEM5Q8N1Q8 247 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 ALLCQ8N6M5 410 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 GIPC2Q8TF65 315 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 PYM1Q9BRP8 204 aaKnown RBP10.46□□□□□ -0.73
USP39-212ENST00000465514 IKZF4Q9H2S9 585 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 ST6GALNAC4Q9H4F1 302 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 TOR4AQ9NXH8 423 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 DPP3Q9NY33 737 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 KIAA1522Q9P206 1035 aaPredicted RBP10.46□□□□□ -0.73
USP39-212ENST00000465514 ZMYM5Q9UJ78 669 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 DSEQ9UL01 958 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 C2CD2Q9Y426 696 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.46□□□□□ -0.73
USP39-212ENST00000465514 STYXL1Q9Y6J8 313 aa10.46□□□□□ -0.73
USP39-212ENST00000465514 TMEM131Q92545 1883 aa10.46□□□□□ -0.74
USP39-212ENST00000465514 CABIN1Q9Y6J0 2220 aa10.46□□□□□ -0.74
USP39-212ENST00000465514 MYO9AB2RTY4 2548 aa10.46□□□□□ -0.74
USP39-212ENST00000465514 UBR5O95071 2799 aaPredicted RBP10.45□□□□□ -0.74
USP39-212ENST00000465514 MYLKQ15746 1914 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 TCRBV21S2A2A0A5A6 115 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 SGK1O00141 431 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 KLF8O95600 359 aaPredicted RBP10.45□□□□□ -0.74
USP39-212ENST00000465514 ATXN1LP0C7T5 689 aaKnown RBP10.45□□□□□ -0.74
USP39-212ENST00000465514 TIE1P35590 1138 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 OPRD1P41143 372 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 IFNAR2P48551 515 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 TAF6P49848 677 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 KCNC4Q03721 635 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 ZNF33AQ06730 810 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 SRSF1Q07955 248 aaKnown RBP eCLIP10.45□□□□□ -0.74
USP39-212ENST00000465514 BYSLQ13895 437 aaKnown RBP10.45□□□□□ -0.74
USP39-212ENST00000465514 TAF12Q16514 161 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 EML3Q32P44 896 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 PLEKHG6Q3KR16 790 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 WSCD1Q658N2 575 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 TXNDC8Q6A555 127 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 CRELD2Q6UXH1 353 aaPredicted RBP10.45□□□□□ -0.74
USP39-212ENST00000465514 USP49Q70CQ1 688 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 DYMQ7RTS9 669 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 ZNF720Q7Z2F6 126 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 SFR1Q86XK3 245 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 SFTPA1Q8IWL2 248 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 EFCAB13Q8IY85 973 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 PGBD3Q8N328 593 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 KRI1Q8N9T8 703 aaKnown RBP10.45□□□□□ -0.74
USP39-212ENST00000465514 TXNDC5Q8NBS9 432 aaKnown RBP10.45□□□□□ -0.74
USP39-212ENST00000465514 SETD7Q8WTS6 366 aaKnown RBP10.45□□□□□ -0.74
USP39-212ENST00000465514 OSCP1Q8WVF1 389 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 POMGNT1Q8WZA1 660 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 EPSTI1Q96J88 318 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 CCSER1Q9C0I3 900 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 KNL1Q8NG31 2342 aa10.45□□□□□ -0.74
USP39-212ENST00000465514 CAPN8A6NHC0 703 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 GOLGA8CPA6NN73 597 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 KPNA7A9QM74 516 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 TULP1O00294 542 aaPredicted RBP10.44□□□□□ -0.74
USP39-212ENST00000465514 DKK1O94907 266 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 HAPLN1P10915 354 aaPredicted RBP10.44□□□□□ -0.74
USP39-212ENST00000465514 DDX6P26196 483 aaKnown RBP eCLIP10.44□□□□□ -0.74
USP39-212ENST00000465514 ADSSP30520 456 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 NLRP12P59046 1061 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 POU5F1Q01860 360 aaKnown RBP10.44□□□□□ -0.74
USP39-212ENST00000465514 SMARCB1Q12824 385 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 GRIK2Q13002 908 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 ZNF268Q14587 947 aaPredicted RBP10.44□□□□□ -0.74
USP39-212ENST00000465514 POSTNQ15063 836 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 ZNF77Q15935 545 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 SLC41A1Q8IVJ1 513 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 DCP1BQ8IZD4 617 aaKnown RBP10.44□□□□□ -0.74
USP39-212ENST00000465514 GALNT15Q8N3T1 639 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 PDCD7Q8N8D1 485 aaKnown RBP10.44□□□□□ -0.74
USP39-212ENST00000465514 FAM181AQ8N9Y4 354 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 IL17RCQ8NAC3 791 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 SPPL2BQ8TCT7 592 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 C2orf15Q8WU43 125 aaKnown RBP10.44□□□□□ -0.74
USP39-212ENST00000465514 HSPA12BQ96MM6 686 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 ABI2Q9NYB9 513 aaPredicted RBP10.44□□□□□ -0.74
USP39-212ENST00000465514 CLIC4Q9Y696 253 aa10.44□□□□□ -0.74
USP39-212ENST00000465514 TP53BP1Q12888 1972 aaPredicted RBP10.43□□□□□ -0.74
USP39-212ENST00000465514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.43□□□□□ -0.74
USP39-212ENST00000465514 TEX51A0A1B0GUA7 166 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 A0A1W2PQD8 194 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 VPS37CA5D8V6 355 aaPredicted RBP10.43□□□□□ -0.74
USP39-212ENST00000465514 MYMKA6NI61 221 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 PPP1R37O75864 691 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 IL18RAPO95256 599 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 F11P03951 625 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 CHRM1P11229 460 aaPredicted RBP10.43□□□□□ -0.74
USP39-212ENST00000465514 HMGA1P17096 107 aaKnown RBP10.43□□□□□ -0.74
USP39-212ENST00000465514 EIF2S3P41091 472 aaKnown RBP10.43□□□□□ -0.74
USP39-212ENST00000465514 WNT7BP56706 349 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 MRPS21P82921 87 aaKnown RBP10.43□□□□□ -0.74
USP39-212ENST00000465514 KCNA1Q09470 495 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 USP4Q13107 963 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 NR1H3Q13133 447 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 SV2CQ496J9 727 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 SLC36A4Q6YBV0 504 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 LRRC69Q6ZNQ3 347 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms