RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 TM7SF2O76062 418 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 C6orf222P0C671 652 aaPredicted RBP13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 CCNFP41002 786 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 RANBP1P43487 201 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 ACTR3P61158 418 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 MRPS5P82675 430 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 SLC18A2Q05940 514 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 MMRN1Q13201 1228 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 DPYSL3Q14195 570 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 ZC3H12AQ5D1E8 599 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 STRIP1Q5VSL9 837 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 TRIM72Q6ZMU5 477 aa13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 IQCGQ9H095 443 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 DDX43Q9NXZ2 648 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 RBAKQ9NYW8 714 aaPredicted RBP13.14□□□□□ -0.31
CLCNKA-204ENST00000464764 ARHGAP42A6NI28 874 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 WDR64B1ANS9 1081 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 MAGEC1O60732 1142 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 OR6B1O95007 311 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 EDN1P05305 212 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 PSMA2P25787 234 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 CAP2P40123 477 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 GRIA2P42262 883 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 ORC1Q13415 861 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 PEX6Q13608 980 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 PSMD6Q15008 389 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 TBC1D25Q3MII6 688 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 RAB6CQ53S08 254 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 SFT2D3Q587I9 215 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 SCARA5Q6ZMJ2 495 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 SAMD3Q8N6K7 520 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 JDP2Q8WYK2 163 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 HSPH1Q92598 858 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 AZIN2Q96A70 460 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 NDNQ99608 321 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 RAB6CQ9H0N0 254 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 PPCSQ9HAB8 311 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 TBC1D22BQ9NU19 505 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 ZNF831Q5JPB2 1677 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 SPECC1L-ADORA2AF8WAN1 911 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 GARTP22102 1010 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 PGM5Q15124 567 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 SMAD1Q15797 465 aaKnown RBP13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 ARHGAP22Q7Z5H3 698 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 PCGF5Q86SE9 256 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 CCDC124Q96CT7 223 aaKnown RBP13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 TARS2Q9BW92 718 aaKnown RBP13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 POLR3FQ9H1D9 316 aaPredicted RBP13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 SLC9A2Q9UBY0 812 aa13.13□□□□□ -0.31
CLCNKA-204ENST00000464764 BUD23O43709 281 aaKnown RBP13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 OPHN1O60890 802 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 LRCH4O75427 683 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 CIB2O75838 187 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 PDE5AO76074 875 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 RBP3P10745 1247 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 EPHB1P54762 984 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 EIF3EP60228 445 aaKnown RBP13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 USP4Q13107 963 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 NCOA4Q13772 614 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 LIN52Q52LA3 116 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 NET1Q7Z628 596 aaPredicted RBP13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 RFX6Q8HWS3 928 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 E2F7Q96AV8 911 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 CALN1Q9BXU9 219 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 SMYD2Q9NRG4 433 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 ANKEF1Q9NU02 776 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 SEPT9Q9UHD8 586 aaPredicted RBP13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 LTBP1Q14766 1721 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 TTLL13PA6NNM8 815 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 LYPLA1O75608 230 aaPredicted RBP13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 ICAM1P05362 532 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 KDELR1P24390 212 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 AP2B1P63010 937 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 MTERF2Q49AM1 385 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 LRRC38Q5VT99 294 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 RASSF3Q86WH2 238 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 ARHGAP24Q8N264 748 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 NR1H4Q96RI1 486 aaPredicted RBP13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 RMDN3Q96TC7 470 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 FETUBQ9UGM5 382 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 TAGLN3Q9UI15 199 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 SERPINA10Q9UK55 444 aa13.12□□□□□ -0.31
CLCNKA-204ENST00000464764 A0A088AWK7 358 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 I3L4J1 428 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 CRABP2P29373 138 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 CLDN10P78369 228 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 SLC25A11Q02978 314 aaKnown RBP13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 SPATA18Q8TC71 538 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 CCDC106Q9BWC9 280 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 CYTH4Q9UIA0 394 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 ADAMTS6Q9UKP5 1117 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 PLLPQ9Y342 182 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 A0A0B4J269 797 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 F8W8V4 182 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 STBD1O95210 358 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 PTGER2P43116 358 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 DLG1Q12959 904 aa13.11□□□□□ -0.31
CLCNKA-204ENST00000464764 GSTA3Q16772 222 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms