RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 OGDHQ02218 1023 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 ASPHQ12797 758 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 MTMR1Q13613 665 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 TBC1D10BQ4KMP7 808 aaPredicted RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 DCAF8Q5TAQ9 597 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 ANGEL2Q5VTE6 544 aaKnown RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 WDR78Q5VTH9 848 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 C1orf146Q5VVC0 180 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 TXNRD3NBQ6F5E7 133 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 DHDDSQ86SQ9 333 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 SLC26A11Q86WA9 606 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 THNSL1Q8IYQ7 743 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 OR6Y1Q8NGX8 325 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 FBXO27Q8NI29 283 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 ACER1Q8TDN7 264 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 RSAD2Q8WXG1 361 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 JADE3Q92613 823 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 E2F7Q96AV8 911 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 MCEEQ96PE7 176 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 FRMD8Q9BZ67 464 aaPredicted RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 IQCGQ9H095 443 aaKnown RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 DNAJC5Q9H3Z4 198 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 S100A14Q9HCY8 104 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 COL20A1Q9P218 1284 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 FEM1BQ9UK73 627 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 ZBTB21Q9ULJ3 1066 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 PPM1HQ9ULR3 514 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 PHF24Q9UPV7 400 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 CHMP2BQ9UQN3 213 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 PLLPQ9Y342 182 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 PCDHAC2Q9Y5I4 1007 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 STYXL1Q9Y6J8 313 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 TCRBV7S3A2A0A539 114 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 AP1G1O43747 822 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 CCNT2O60583 730 aaKnown RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 SNNO75324 88 aaPredicted RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 KRT37O76014 449 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 C1QAP02745 245 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 ICAM1P05362 532 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 KRT7P08729 469 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 SNRPAP09012 282 aaKnown RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 UQCRBP14927 111 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 CDH5P33151 784 aaPredicted RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 CPOXP36551 454 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 ELK3P41970 407 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 CLCN2P51788 898 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 BST1Q10588 318 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 WASHC5Q12768 1159 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 ITGA9Q13797 1035 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 VPS72Q15906 364 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 KBTBD12Q3ZCT8 623 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 EFHC1Q5JVL4 640 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 DACT2Q5SW24 774 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 STRIP1Q5VSL9 837 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 SPOPLQ6IQ16 392 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 DCUN1D2Q6PH85 259 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 PRPF39Q86UA1 669 aaKnown RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 LCA5Q86VQ0 697 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 MCF2L2Q86YR7 1114 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 MCPH1Q8NEM0 835 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 NAT14Q8WUY8 206 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 ZNF606Q8WXB4 792 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 DDX50Q9BQ39 737 aaKnown RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 LBHD1Q9BQE6 289 aaPredicted RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 SH2D3AQ9BRG2 576 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 THTPAQ9BU02 230 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 EBF3Q9H4W6 596 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 STN1Q9H668 368 aaKnown RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 ARHGAP28Q9P2N2 729 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 SOX13Q9UN79 622 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 AGTPBP1Q9UPW5 1226 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 HBS1LQ9Y450 684 aaKnown RBP7.61□□□□□ -1.19
USP48-206ENST00000464577 TEX264Q9Y6I9 313 aa7.61□□□□□ -1.19
USP48-206ENST00000464577 A0A088AWK7 358 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 KBTBD13C9JR72 458 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 POLRMTO00411 1230 aaKnown RBP7.6□□□□□ -1.19
USP48-206ENST00000464577 BIRC5O15392 142 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 CST8O60676 142 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 BAG2O95816 211 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 CCNE2O96020 404 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 TNNI1P19237 187 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 VASPP50552 380 aaPredicted RBP7.6□□□□□ -1.19
USP48-206ENST00000464577 RBM5P52756 815 aaKnown RBP eCLIP7.6□□□□□ -1.19
USP48-206ENST00000464577 MRPS9P82933 396 aaKnown RBP7.6□□□□□ -1.19
USP48-206ENST00000464577 TMPRSS15P98073 1019 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 SLC25A11Q02978 314 aaKnown RBP7.6□□□□□ -1.19
USP48-206ENST00000464577 HIC1Q14526 733 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 KCNJ11Q14654 390 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 MAP3K21Q5TCX8 1036 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 LGSNQ5TDP6 509 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 RAPH1Q70E73 1250 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 ANO5Q75V66 913 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 ARCQ7LC44 396 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 TAS1R3Q7RTX0 852 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 CRLF3Q8IUI8 442 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 ARID3BQ8IVW6 561 aaPredicted RBP7.6□□□□□ -1.19
USP48-206ENST00000464577 TMEM35BQ8NCS4 154 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 FNIP1Q8TF40 1166 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 FAM84AQ96KN4 292 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 ACAP3Q96P50 834 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms