RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SLITRK1Q96PX8 696 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 RPP25Q9BUL9 199 aaKnown RBP15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 SLC46A2Q9BY10 475 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 UBXN6Q9BZV1 441 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 FBXO44Q9H4M3 255 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 ZFP14Q9HCL3 533 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 PLCB1Q9NQ66 1216 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 TRPM5Q9NZQ8 1165 aa15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 AJAP1Q9UKB5 411 aaPredicted RBP15.34■□□□□ 0.05
SQSTM1-205ENST00000464493 ZNF840PA6NDX5 716 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 GOLGA6L19H0YKK7 550 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 FOXN3O00409 490 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 ECI2O75521 394 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 CALCAP01258 141 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 UCHL3P15374 230 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 RFX1P22670 979 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 BRD2P25440 801 aaKnown RBP15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 WEE1P30291 646 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 KLK7P49862 253 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 BCAT1P54687 386 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 ZXDAP98168 799 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 SYCP1Q15431 976 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 FILIP1LQ4L180 1135 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 LRSAM1Q6UWE0 723 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 MON1AQ86VX9 555 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 TTC30AQ86WT1 665 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 ARID3BQ8IVW6 561 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 UBA3Q8TBC4 463 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 OVCA2Q8WZ82 227 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 FBXO32Q969P5 355 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 PCMTD1Q96MG8 357 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 ZSWIM1Q9BR11 485 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 NAA15Q9BXJ9 866 aaKnown RBP15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 TRPV4Q9HBA0 871 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 CHORDC1Q9UHD1 332 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 SIK3Q9Y2K2 1263 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 FHOD1Q9Y613 1164 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 OBSL1O75147 1896 aa15.33■□□□□ 0.04
SQSTM1-205ENST00000464493 FAM92AA1XBS5 289 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 ABL1P00519 1130 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 FCARP24071 287 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 GNA15P30679 374 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 AVPR1AP37288 418 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 PDE4CQ08493 712 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 BST2Q10589 180 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 RAPGEF1Q13905 1077 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 DRAP1Q14919 205 aaPredicted RBP15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 PKDCCQ504Y2 493 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 GPRIN1Q7Z2K8 1008 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 PIGZQ86VD9 579 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 GPIHBP1Q8IV16 184 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 UBALD2Q8IYN6 164 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 CMTM8Q8IZV2 173 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 PDZD8Q8NEN9 1154 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 ZNF606Q8WXB4 792 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 EDAQ92838 391 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 E2F7Q96AV8 911 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 ERGIC2Q96RQ1 377 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 KXD1Q9BQD3 176 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 STK33Q9BYT3 514 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 PLA2G2FQ9BZM2 168 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 TSPY26PQ9H489 355 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 EPHX3Q9H6B9 360 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 TRPC7Q9HCX4 862 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 RTN4Q9NQC3 1192 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 FAM207AQ9NSI2 230 aaPredicted RBP15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 ANAPC1Q9H1A4 1944 aa15.32■□□□□ 0.04
SQSTM1-205ENST00000464493 TRAV19A0A0A6YYK7 116 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 XPO1O14980 1071 aaKnown RBP15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 CYP26A1O43174 497 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 TEX33O43247 280 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 MED7O43513 233 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 SERPINC1P01008 464 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 SETSIPP0DME0 302 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 VIPR2P41587 438 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 KIF11P52732 1056 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 POLR2FP61218 127 aaKnown RBP15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 PTK2Q05397 1052 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 FAM71AQ8IYT1 594 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 CYP2S1Q96SQ9 504 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 GANQ9H2C0 597 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 SMOC2Q9H3U7 446 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 ACP6Q9NPH0 428 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 DUSP12Q9UNI6 340 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 SCML2Q9UQR0 700 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 NCANO14594 1321 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 PATJQ8NI35 1801 aa15.31■□□□□ 0.04
SQSTM1-205ENST00000464493 C2orf78A6NCI8 922 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 HEPACAM2A8MVW5 462 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 M0QYV0 167 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 TULP2O00295 520 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 DPYSL4O14531 572 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 THAP12O43422 761 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 NARSO43776 548 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 USP17L7P0C7H9 530 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 ZDHHC11BP0C7U3 371 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 PNMA6AP0CW24 399 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 PFKLP17858 780 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 HDCP19113 662 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms