RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 SLC30A5Q8TAD4 765 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 FAM71BQ8TC56 605 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 SH3RF3Q8TEJ3 882 aaPredicted RBP4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 TMEM171Q8WVE6 324 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 ATRIPQ8WXE1 791 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 PPM1EQ8WY54 764 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 ATG4AQ8WYN0 398 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 INO80BQ9C086 356 aaPredicted RBP4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 MYLK2Q9H1R3 596 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 GLOD4Q9HC38 313 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 GBA2Q9HCG7 927 aaPredicted RBP4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 TMEM8AQ9HCN3 771 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 OBP2BQ9NPH6 170 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 CASS4Q9NQ75 786 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 CA14Q9ULX7 337 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 SNX14Q9Y5W7 946 aa4.33□□□□□ -1.72
HMGXB4-205ENST00000464480 TTBK1Q5TCY1 1321 aaPredicted RBP4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 C1QTNF3-AMACRE9PGA6 284 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 ACKR2O00590 384 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 PIP5K1BO14986 540 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 NPC1O15118 1278 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 PPM1DO15297 605 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 SLC16A3O15427 465 aaKnown RBP4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 PROM1O43490 865 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 SNX2O60749 519 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 NXPH3O95157 252 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 EGR2P11161 476 aaPredicted RBP4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 HGFP14210 728 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 PECAM1P16284 738 aaPredicted RBP4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 RBL1P28749 1068 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 SCAPQ12770 1279 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 EIF2B5Q13144 721 aaKnown RBP4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 FOXE3Q13461 319 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 RAPGEF1Q13905 1077 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 PTK2BQ14289 1009 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 SF3B3Q15393 1217 aaKnown RBP4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 PTCHD3Q3KNS1 767 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 MIIPQ5JXC2 388 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 ZNF618Q5T7W0 954 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 MANEALQ5VSG8 457 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 RAP1GAP2Q684P5 730 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 IZUMO1Q8IYV9 350 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 CACNA2D3Q8IZS8 1091 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 ABRAQ8N0Z2 381 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 LNX2Q8N448 690 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 TOR1AIP2Q8NFQ8 470 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 MYCBPAPQ8TBZ2 947 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 TRAPPC12Q8WVT3 735 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 ASB10Q8WXI3 467 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 LPIN2Q92539 896 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 GRAMD1AQ96CP6 724 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 ZNF503Q96F45 646 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 ZDHHC12Q96GR4 267 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 PGBD1Q96JS3 809 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 HIST1H2AAQ96QV6 131 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 PRPF18Q99633 342 aaKnown RBP4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 PAGR1Q9BTK6 254 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 ALG8Q9BVK2 526 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 AS3MTQ9HBK9 375 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 SLC2A4RGQ9NR83 387 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 KCTD5Q9NXV2 234 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 DACT1Q9NYF0 836 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 ANKFY1Q9P2R3 1169 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 USP22Q9UPT9 525 aa4.32□□□□□ -1.72
HMGXB4-205ENST00000464480 PIPSLA2A3N6 862 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 AQP12BA6NM10 295 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 PEX1O43933 1283 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 PIP5K1CO60331 668 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 VIPP01282 170 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 ITGA5P08648 1049 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 NPPBP16860 134 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 UQCRC1P31930 480 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 SERPINF1P36955 418 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 PPM1FP49593 454 aaPredicted RBP4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 ATXN1P54253 815 aaKnown RBP4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 TIAL1Q01085 375 aaKnown RBP eCLIP4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 GALNT1Q10472 559 aaPredicted RBP4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 PTPAQ15257 358 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 LSM12Q3MHD2 195 aaKnown RBP4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 ARHGAP15Q53QZ3 475 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 HSP90AB4PQ58FF6 505 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 TMTC4Q5T4D3 741 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 VWA1Q6PCB0 445 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 MRGPREQ86SM8 312 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 DTX2Q86UW9 622 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 MYRIPQ8NFW9 859 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 MBD3L2Q8NHZ7 208 aaPredicted RBP4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 ABHD5Q8WTS1 349 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 FKBP10Q96AY3 582 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 GPR20Q99678 358 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 ISCA1Q9BUE6 129 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 VN1R3Q9BXE9 311 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 HELLSQ9NRZ9 838 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 IGSF9Q9P2J2 1179 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 VPS51Q9UID3 782 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 HS3ST4Q9Y661 456 aa4.31□□□□□ -1.72
HMGXB4-205ENST00000464480 ADGRA2Q96PE1 1338 aa4.3□□□□□ -1.72
HMGXB4-205ENST00000464480 OR2W5A6NFC9 320 aa4.3□□□□□ -1.72
HMGXB4-205ENST00000464480 PSMD9O00233 223 aa4.3□□□□□ -1.72
HMGXB4-205ENST00000464480 TRIM38O00635 465 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms