RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 STK25O00506 426 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 TNFRSF10BO14763 440 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 ZNF263O14978 683 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 RTN3O95197 1032 aaPredicted RBP18.02■□□□□ 0.48
VPS52-215ENST00000464425 PHLDB3Q6NSJ2 640 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 TMEM270Q6UE05 265 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 CLEC20AQ6ZU45 233 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 SUGP1Q8IWZ8 645 aaKnown RBP18.02■□□□□ 0.48
VPS52-215ENST00000464425 YAF2Q8IY57 180 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 FBXL6Q8N531 539 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 UBR7Q8N806 425 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 FLCNQ8NFG4 579 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 DEPDC1BQ8WUY9 529 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 USP13Q92995 863 aaPredicted RBP18.02■□□□□ 0.48
VPS52-215ENST00000464425 FBXO32Q969P5 355 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 SLITRK1Q96PX8 696 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 CSNK1G1Q9HCP0 422 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 ARHGEF3Q9NR81 526 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 CHORDC1Q9UHD1 332 aaPredicted RBP18.02■□□□□ 0.48
VPS52-215ENST00000464425 ZMYM5Q9UJ78 669 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 CCL26Q9Y258 94 aa18.02■□□□□ 0.48
VPS52-215ENST00000464425 ZDBF2Q9HCK1 2354 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 TRAV19A0A0A6YYK7 116 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 ZNF840PA6NDX5 716 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 ATP1A3P13637 1013 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 CD19P15391 556 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 NPR3P17342 541 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 SLC9A1P19634 815 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 ACO1P21399 889 aaKnown RBP18.01■□□□□ 0.47
VPS52-215ENST00000464425 WEE1P30291 646 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 COPB1P53618 953 aaKnown RBP18.01■□□□□ 0.47
VPS52-215ENST00000464425 PFKPQ01813 784 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 APBA1Q02410 837 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 SLC44A4Q53GD3 710 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 GJB7Q6PEY0 223 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 GBP6Q6ZN66 633 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 APTXQ7Z2E3 356 aaKnown RBP18.01■□□□□ 0.47
VPS52-215ENST00000464425 GPRIN1Q7Z2K8 1008 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 CELF5Q8N6W0 485 aaKnown RBP18.01■□□□□ 0.47
VPS52-215ENST00000464425 ARL14EPQ8N8R7 260 aaPredicted RBP18.01■□□□□ 0.47
VPS52-215ENST00000464425 TTC16Q8NEE8 873 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 KREMEN1Q96MU8 473 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 DUSP16Q9BY84 665 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 UBE2TQ9NPD8 197 aaPredicted RBP18.01■□□□□ 0.47
VPS52-215ENST00000464425 TAB2Q9NYJ8 693 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 RAPGEFL1Q9UHV5 662 aa18.01■□□□□ 0.47
VPS52-215ENST00000464425 GREB1Q4ZG55 1949 aa18■□□□□ 0.47
VPS52-215ENST00000464425 SOBPA7XYQ1 873 aa18■□□□□ 0.47
VPS52-215ENST00000464425 HHLA1C9JL84 531 aa18■□□□□ 0.47
VPS52-215ENST00000464425 RNF225M0QZC1 329 aaPredicted RBP18■□□□□ 0.47
VPS52-215ENST00000464425 CALCAP01258 141 aa18■□□□□ 0.47
VPS52-215ENST00000464425 CKMP06732 381 aa18■□□□□ 0.47
VPS52-215ENST00000464425 HDCP19113 662 aa18■□□□□ 0.47
VPS52-215ENST00000464425 RFX1P22670 979 aa18■□□□□ 0.47
VPS52-215ENST00000464425 PPP3CCP48454 512 aa18■□□□□ 0.47
VPS52-215ENST00000464425 GCNT1Q02742 428 aa18■□□□□ 0.47
VPS52-215ENST00000464425 EXOC3L4Q17RC7 722 aa18■□□□□ 0.47
VPS52-215ENST00000464425 SGO2Q562F6 1265 aa18■□□□□ 0.47
VPS52-215ENST00000464425 ARHGAP17Q68EM7 881 aa18■□□□□ 0.47
VPS52-215ENST00000464425 BPIFB1Q8TDL5 484 aa18■□□□□ 0.47
VPS52-215ENST00000464425 IRF7Q92985 503 aa18■□□□□ 0.47
VPS52-215ENST00000464425 ZFYVE19Q96K21 471 aa18■□□□□ 0.47
VPS52-215ENST00000464425 VPS16Q9H269 839 aa18■□□□□ 0.47
VPS52-215ENST00000464425 TDP1Q9NUW8 608 aa18■□□□□ 0.47
VPS52-215ENST00000464425 IL37Q9NZH6 218 aa18■□□□□ 0.47
VPS52-215ENST00000464425 MYH10P35580 1976 aa17.99■□□□□ 0.47
VPS52-215ENST00000464425 PES1O00541 588 aaKnown RBP17.99■□□□□ 0.47
VPS52-215ENST00000464425 USP17L7P0C7H9 530 aa17.99■□□□□ 0.47
VPS52-215ENST00000464425 COL9A1P20849 921 aa17.99■□□□□ 0.47
VPS52-215ENST00000464425 PON1P27169 355 aa17.99■□□□□ 0.47
VPS52-215ENST00000464425 VCPP55072 806 aaKnown RBP17.99■□□□□ 0.47
VPS52-215ENST00000464425 FCHO2Q0JRZ9 810 aa17.99■□□□□ 0.47
VPS52-215ENST00000464425 MLF2Q15773 248 aaPredicted RBP17.99■□□□□ 0.47
VPS52-215ENST00000464425 GOLGA7BQ2TAP0 167 aa17.99■□□□□ 0.47
VPS52-215ENST00000464425 TRIM65Q6PJ69 517 aa17.99■□□□□ 0.47
VPS52-215ENST00000464425 RNF38Q9H0F5 515 aa17.99■□□□□ 0.47
VPS52-215ENST00000464425 TBC1D17Q9HA65 648 aa17.99■□□□□ 0.47
VPS52-215ENST00000464425 HEBP1Q9NRV9 189 aa17.99■□□□□ 0.47
VPS52-215ENST00000464425 COMMD8Q9NX08 183 aa17.99■□□□□ 0.47
VPS52-215ENST00000464425 OBP2AQ9NY56 170 aa17.99■□□□□ 0.47
VPS52-215ENST00000464425 GMIPQ9P107 970 aa17.99■□□□□ 0.47
VPS52-215ENST00000464425 DENND4CQ5VZ89 1909 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 LGALS16A8MUM7 142 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 CHADO15335 359 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 VDRP11473 427 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 KRT5P13647 590 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 AVPR2P30518 371 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 PGFP49763 221 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 FKBP15Q5T1M5 1219 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 CWF19L1Q69YN2 538 aaKnown RBP17.98■□□□□ 0.47
VPS52-215ENST00000464425 ASTLQ6HA08 431 aaPredicted RBP17.98■□□□□ 0.47
VPS52-215ENST00000464425 ANKRD52Q8NB46 1076 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 RBBP8NLQ8NC74 664 aaPredicted RBP17.98■□□□□ 0.47
VPS52-215ENST00000464425 PDZD8Q8NEN9 1154 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 TTC8Q8TAM2 541 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 RIN3Q8TB24 985 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 UBA3Q8TBC4 463 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 TFAP2BQ92481 460 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 FBXO44Q9H4M3 255 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 THG1LQ9NWX6 298 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms