RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 ZIC5Q96T25 663 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 NDNQ99608 321 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 CHST7Q9NS84 486 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 ZDHHC3Q9NYG2 299 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 PTTG2Q9NZH5 202 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 HSPBP1Q9NZL4 362 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 PCDHGC4Q9Y5F7 938 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 SCN4AP35499 1836 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 NRAPQ86VF7 1730 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 RGPD3A6NKT7 1758 aaPredicted RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 RGPD4Q7Z3J3 1758 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 XIRP1Q702N8 1843 aaKnown RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 TCRBV7S2A1N4TA0A589 114 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 B2RBV5 119 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 SHISA8B8ZZ34 492 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 FCHO1O14526 889 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 HGSO14964 777 aaPredicted RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 TP73O15350 636 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 BIRC5O15392 142 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 AP1G1O43747 822 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 LIASO43766 372 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 OPHN1O60890 802 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 RPS6KA4O75676 772 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 LYPLA2O95372 231 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 LSM8O95777 96 aaKnown RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 P4HBP07237 508 aaKnown RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 INHBAP08476 426 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 POLR2MP0CAP2 368 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 RALAP11233 206 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 BMP4P12644 408 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 KRT5P13647 590 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 TBXAS1P24557 533 aaPredicted RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 ACAT1P24752 427 aaKnown RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 CNTFP26441 200 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 CDC25CP30307 473 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 MAGEA8P43361 318 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 GCLMP48507 274 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 VCPP55072 806 aaKnown RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 GTF2BQ00403 316 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 FOXK2Q01167 660 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 PLCB3Q01970 1234 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 PDIA2Q13087 525 aaKnown RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 GPS1Q13098 491 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 IKQ13123 557 aaPredicted RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 ITPK1Q13572 414 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 THOC5Q13769 683 aaKnown RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 PIGHQ14442 188 aaPredicted RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 PKN2Q16513 984 aaKnown RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 CNPY1Q3B7I2 92 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 ZC2HC1CQ53FD0 456 aaPredicted RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 ACSBG2Q5FVE4 666 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 ZFYVE27Q5T4F4 411 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 RNF220Q5VTB9 566 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 C1orf146Q5VVC0 180 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 HHIPL2Q6UWX4 724 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 IZUMO2Q6UXV1 221 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 ANO5Q75V66 913 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 PALB2Q86YC2 1186 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 PHF13Q86YI8 300 aaPredicted RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 CRLF3Q8IUI8 442 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 CROCCP3Q8IVE0 287 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 ARHGEF19Q8IW93 802 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 RNF168Q8IYW5 571 aaPredicted RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 ZBED8Q8IZ13 594 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 LRRC43Q8N309 656 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 BEND7Q8N7W2 519 aaPredicted RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 BANPQ8N9N5 519 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 SUPT20HQ8NEM7 779 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 TRPC4APQ8TEL6 797 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 ZDHHC1Q8WTX9 485 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 AZIN2Q96A70 460 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 DGCR14Q96DF8 476 aaKnown RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 DYDC2Q96IM9 177 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 FAM161BQ96MY7 647 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 PCDHB18PQ96TA0 734 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 SENP7Q9BQF6 1050 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 DHRS4Q9BTZ2 278 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 TMEM120AQ9BXJ8 343 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 KLHL4Q9C0H6 718 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 TMEM117Q9H0C3 514 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 DHX33Q9H6R0 707 aaKnown RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 MKS1Q9NXB0 559 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 HACD3Q9P035 362 aa7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 GDF2Q9UK05 429 aaPredicted RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 ZMYND8Q9ULU4 1186 aaPredicted RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 MRPL11Q9Y3B7 192 aaKnown RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 DNMT3AQ9Y6K1 912 aaPredicted RBP7.51□□□□□ -1.21
CLSTN1-204ENST00000464286 FAM196BA6NMK8 535 aa7.5□□□□□ -1.21
CLSTN1-204ENST00000464286 FAM86B1E9PN63 330 aa7.5□□□□□ -1.21
CLSTN1-204ENST00000464286 COPEO14579 308 aa7.5□□□□□ -1.21
CLSTN1-204ENST00000464286 TRDMT1O14717 391 aaKnown RBP7.5□□□□□ -1.21
CLSTN1-204ENST00000464286 ATXN7O15265 892 aaPredicted RBP7.5□□□□□ -1.21
CLSTN1-204ENST00000464286 TBX10O75333 385 aa7.5□□□□□ -1.21
CLSTN1-204ENST00000464286 ZNF189O75820 626 aaPredicted RBP7.5□□□□□ -1.21
CLSTN1-204ENST00000464286 PSMD10O75832 226 aa7.5□□□□□ -1.21
CLSTN1-204ENST00000464286 KRT36O76013 467 aa7.5□□□□□ -1.21
CLSTN1-204ENST00000464286 UFL1O94874 794 aa7.5□□□□□ -1.21
CLSTN1-204ENST00000464286 KRT1P04264 644 aa7.5□□□□□ -1.21
CLSTN1-204ENST00000464286 KRT7P08729 469 aa7.5□□□□□ -1.21
CLSTN1-204ENST00000464286 FAM86B2P0C5J1 330 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms