RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 EPC1Q9H2F5 836 aa22.09■■□□□ 1.13
CD58-204ENST00000464088 PLCB1Q9NQ66 1216 aa22.09■■□□□ 1.13
CD58-204ENST00000464088 RTN4Q9NQC3 1192 aaKnown RBP22.09■■□□□ 1.13
CD58-204ENST00000464088 TMEM30AQ9NV96 361 aa22.09■■□□□ 1.13
CD58-204ENST00000464088 CDH7Q9ULB5 785 aa22.09■■□□□ 1.13
CD58-204ENST00000464088 MTF2Q9Y483 593 aaPredicted RBP22.09■■□□□ 1.13
CD58-204ENST00000464088 A0A1B0GTH6 734 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 GOLGA6L19H0YKK7 550 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 RNF225M0QZC1 329 aaPredicted RBP22.08■■□□□ 1.13
CD58-204ENST00000464088 CCDC130P13994 396 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 ALDH1A3P47895 512 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 KLK7P49862 253 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 MFAP3P55082 362 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 TPM4P67936 248 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 LMNB2Q03252 620 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 SLC44A4Q53GD3 710 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 SMYD5Q6GMV2 418 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 ST13P5Q8NFI4 369 aaPredicted RBP22.08■■□□□ 1.13
CD58-204ENST00000464088 SECISBP2LQ93073 1101 aaKnown RBP22.08■■□□□ 1.13
CD58-204ENST00000464088 HNRNPABQ99729 332 aaKnown RBP22.08■■□□□ 1.13
CD58-204ENST00000464088 GANQ9H2C0 597 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 FAM49BQ9NUQ9 324 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 HCFC1R1Q9NWW0 138 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 ZSCAN32Q9NX65 697 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 DNMT3BQ9UBC3 853 aaKnown RBP22.08■■□□□ 1.13
CD58-204ENST00000464088 DNAJC12Q9UKB3 198 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 PCDHB4Q9Y5E5 795 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 ZFHX4Q86UP3 3567 aa22.08■■□□□ 1.13
CD58-204ENST00000464088 MYH10P35580 1976 aa22.08■■□□□ 1.12
CD58-204ENST00000464088 TEX33O43247 280 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 NOL4O94818 638 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 TGM1P22735 817 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 CACNA2D1P54289 1103 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 EPHB3P54753 998 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 UBXN1Q04323 297 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 CSTF1Q05048 431 aaKnown RBP22.07■■□□□ 1.12
CD58-204ENST00000464088 SYCP1Q15431 976 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 ARHGAP17Q68EM7 881 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 IQCEQ6IPM2 695 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 TMEM270Q6UE05 265 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 MTSS1LQ765P7 747 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 GRASPQ7Z6J2 395 aaPredicted RBP22.07■■□□□ 1.12
CD58-204ENST00000464088 SLC2A14Q8TDB8 520 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 SHC3Q92529 594 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 HEXIM2Q96MH2 286 aaKnown RBP22.07■■□□□ 1.12
CD58-204ENST00000464088 NAP1L5Q96NT1 182 aaPredicted RBP22.07■■□□□ 1.12
CD58-204ENST00000464088 RTKNQ9BST9 563 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 NAA15Q9BXJ9 866 aaKnown RBP22.07■■□□□ 1.12
CD58-204ENST00000464088 LRRC3Q9BY71 257 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 ASB3Q9Y575 518 aa22.07■■□□□ 1.12
CD58-204ENST00000464088 FAM170BA6NMN3 283 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 PAEPP09466 180 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 EPHA5P54756 1037 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 RPL10AP62906 217 aaKnown RBP22.06■■□□□ 1.12
CD58-204ENST00000464088 NTHL1P78549 312 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 FANCCQ00597 558 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 DDR2Q16832 855 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 PPP1R26Q5T8A7 1209 aaPredicted RBP22.06■■□□□ 1.12
CD58-204ENST00000464088 SDHAF4Q5VUM1 108 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 RBBP8NLQ8NC74 664 aaPredicted RBP22.06■■□□□ 1.12
CD58-204ENST00000464088 PSMG2Q969U7 264 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 CLDN23Q96B33 292 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 CYFIP2Q96F07 1278 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 C8orf48Q96LL4 319 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 GPR88Q9GZN0 384 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 DNAI2Q9GZS0 605 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 LTB4R2Q9NPC1 389 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 AVENQ9NQS1 362 aaPredicted RBP22.06■■□□□ 1.12
CD58-204ENST00000464088 CDV3Q9UKY7 258 aaKnown RBP22.06■■□□□ 1.12
CD58-204ENST00000464088 SMG5Q9UPR3 1016 aaKnown RBP22.06■■□□□ 1.12
CD58-204ENST00000464088 FHOD1Q9Y613 1164 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 ATP8B3O60423 1300 aa22.06■■□□□ 1.12
CD58-204ENST00000464088 EPHB6O15197 1021 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 UCHL3P15374 230 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 PTPN2P17706 415 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 TRIM21P19474 475 aaKnown RBP22.05■■□□□ 1.12
CD58-204ENST00000464088 PFKPQ01813 784 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 NR1I3Q14994 352 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 UBXN2BQ14CS0 331 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 ARHGAP44Q17R89 818 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 DNAJB7Q7Z6W7 309 aaPredicted RBP22.05■■□□□ 1.12
CD58-204ENST00000464088 TMC8Q8IU68 726 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 SCN4BQ8IWT1 228 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 RNF214Q8ND24 703 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 GIPC2Q8TF65 315 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 FGF13Q92913 245 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 SMARCD1Q96GM5 515 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 SPATA17Q96L03 361 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 CEP295NLQ96MC4 621 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 ZNF512Q96ME7 567 aaPredicted RBP22.05■■□□□ 1.12
CD58-204ENST00000464088 MED10Q9BTT4 135 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 CSNK1G1Q9HCP0 422 aa22.05■■□□□ 1.12
CD58-204ENST00000464088 F8VP50 259 aa22.04■■□□□ 1.12
CD58-204ENST00000464088 SERPINC1P01008 464 aa22.04■■□□□ 1.12
CD58-204ENST00000464088 RHOP08100 348 aa22.04■■□□□ 1.12
CD58-204ENST00000464088 VDRP11473 427 aa22.04■■□□□ 1.12
CD58-204ENST00000464088 HMGA1P17096 107 aaKnown RBP22.04■■□□□ 1.12
CD58-204ENST00000464088 RPS9P46781 194 aaKnown RBP22.04■■□□□ 1.12
CD58-204ENST00000464088 FILIP1LQ4L180 1135 aa22.04■■□□□ 1.12
CD58-204ENST00000464088 HS6ST3Q8IZP7 471 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms