RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 P4HA1P13674 534 aa20.04■□□□□ 0.8
SF3A1-205ENST00000463818 YWHAQP27348 245 aa20.04■□□□□ 0.8
SF3A1-205ENST00000463818 CNR2P34972 360 aa20.04■□□□□ 0.8
SF3A1-205ENST00000463818 SLC7A9P82251 487 aa20.04■□□□□ 0.8
SF3A1-205ENST00000463818 IFRD2Q12894 506 aaPredicted RBP20.04■□□□□ 0.8
SF3A1-205ENST00000463818 C1orf220Q5T0J3 134 aa20.04■□□□□ 0.8
SF3A1-205ENST00000463818 ERMP1Q7Z2K6 904 aa20.04■□□□□ 0.8
SF3A1-205ENST00000463818 CD101Q93033 1021 aa20.04■□□□□ 0.8
SF3A1-205ENST00000463818 TNIP3Q96KP6 325 aa20.04■□□□□ 0.8
SF3A1-205ENST00000463818 SLITRK1Q96PX8 696 aa20.04■□□□□ 0.8
SF3A1-205ENST00000463818 GOLPH3LQ9H4A5 285 aa20.04■□□□□ 0.8
SF3A1-205ENST00000463818 ATP8B3O60423 1300 aa20.03■□□□□ 0.8
SF3A1-205ENST00000463818 RNF40O75150 1001 aa20.03■□□□□ 0.8
SF3A1-205ENST00000463818 ZNF202O95125 648 aa20.03■□□□□ 0.8
SF3A1-205ENST00000463818 TGM1P22735 817 aa20.03■□□□□ 0.8
SF3A1-205ENST00000463818 VAMP7P51809 220 aa20.03■□□□□ 0.8
SF3A1-205ENST00000463818 LAIR1Q6GTX8 287 aa20.03■□□□□ 0.8
SF3A1-205ENST00000463818 ACOT1Q86TX2 421 aa20.03■□□□□ 0.8
SF3A1-205ENST00000463818 FAM35AQ86V20 835 aa20.03■□□□□ 0.8
SF3A1-205ENST00000463818 WDR5BQ86VZ2 330 aa20.03■□□□□ 0.8
SF3A1-205ENST00000463818 TAF4BQ92750 862 aa20.03■□□□□ 0.8
SF3A1-205ENST00000463818 GDPD2Q9HCC8 539 aa20.03■□□□□ 0.8
SF3A1-205ENST00000463818 CHORDC1Q9UHD1 332 aaPredicted RBP20.03■□□□□ 0.8
SF3A1-205ENST00000463818 SLC8A2Q9UPR5 921 aa20.03■□□□□ 0.8
SF3A1-205ENST00000463818 CPQQ9Y646 472 aa20.03■□□□□ 0.8
SF3A1-205ENST00000463818 MAPK13O15264 365 aa20.02■□□□□ 0.8
SF3A1-205ENST00000463818 RTN3O95197 1032 aaPredicted RBP20.02■□□□□ 0.8
SF3A1-205ENST00000463818 HLA-DRAP01903 254 aa20.02■□□□□ 0.8
SF3A1-205ENST00000463818 NR2F2P24468 414 aa20.02■□□□□ 0.8
SF3A1-205ENST00000463818 PUM1Q14671 1186 aaKnown RBP eCLIP20.02■□□□□ 0.83e-11■□□□□ 9.7
SF3A1-205ENST00000463818 NFIL3Q16649 462 aa20.02■□□□□ 0.8
SF3A1-205ENST00000463818 RSPO4Q2I0M5 234 aaPredicted RBP20.02■□□□□ 0.8
SF3A1-205ENST00000463818 FBXO43Q4G163 708 aa20.02■□□□□ 0.8
SF3A1-205ENST00000463818 SPOPLQ6IQ16 392 aa20.02■□□□□ 0.8
SF3A1-205ENST00000463818 CRYBG2Q8N1P7 616 aa20.02■□□□□ 0.8
SF3A1-205ENST00000463818 SCAMP5Q8TAC9 235 aa20.02■□□□□ 0.8
SF3A1-205ENST00000463818 FBXO32Q969P5 355 aa20.02■□□□□ 0.8
SF3A1-205ENST00000463818 POLR3BQ9NW08 1133 aaPredicted RBP20.02■□□□□ 0.8
SF3A1-205ENST00000463818 SMPD4Q9NXE4 827 aa20.02■□□□□ 0.8
SF3A1-205ENST00000463818 USP18Q9UMW8 372 aa20.02■□□□□ 0.8
SF3A1-205ENST00000463818 TNFRSF10BO14763 440 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 AKAP3O75969 853 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 NFATC1O95644 943 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 OLFM2O95897 454 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 ASS1P00966 412 aaKnown RBP20.01■□□□□ 0.79
SF3A1-205ENST00000463818 OAS1P00973 400 aaKnown RBP20.01■□□□□ 0.79
SF3A1-205ENST00000463818 RETP07949 1114 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 PXNP49023 591 aaPredicted RBP20.01■□□□□ 0.79
SF3A1-205ENST00000463818 NDST1P52848 882 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 ORC1Q13415 861 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 ADAM9Q13443 819 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 CEP68Q76N32 757 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 ADGRG2Q8IZP9 1017 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 FUKQ8N0W3 1084 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 GUF1Q8N442 669 aaKnown RBP20.01■□□□□ 0.79
SF3A1-205ENST00000463818 PDZD8Q8NEN9 1154 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 EZH1Q92800 747 aaPredicted RBP20.01■□□□□ 0.79
SF3A1-205ENST00000463818 PARD6AQ9NPB6 346 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 DMAP1Q9NPF5 467 aaPredicted RBP20.01■□□□□ 0.79
SF3A1-205ENST00000463818 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.01■□□□□ 0.79
SF3A1-205ENST00000463818 DLL3Q9NYJ7 618 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 IL37Q9NZH6 218 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 DENND4CQ5VZ89 1909 aa20.01■□□□□ 0.79
SF3A1-205ENST00000463818 AP1G2O75843 785 aa20■□□□□ 0.79
SF3A1-205ENST00000463818 MBL2P11226 248 aaPredicted RBP20■□□□□ 0.79
SF3A1-205ENST00000463818 RPL13P26373 211 aaKnown RBP20■□□□□ 0.79
SF3A1-205ENST00000463818 PSMC2P35998 433 aaKnown RBP20■□□□□ 0.79
SF3A1-205ENST00000463818 PIK3CAP42336 1068 aa20■□□□□ 0.79
SF3A1-205ENST00000463818 GCLMP48507 274 aa20■□□□□ 0.79
SF3A1-205ENST00000463818 SPEM2Q0P670 501 aa20■□□□□ 0.79
SF3A1-205ENST00000463818 INTS8Q75QN2 995 aaKnown RBP20■□□□□ 0.79
SF3A1-205ENST00000463818 DGLUCYQ7Z3D6 616 aa20■□□□□ 0.79
SF3A1-205ENST00000463818 FILIP1Q7Z7B0 1213 aa20■□□□□ 0.79
SF3A1-205ENST00000463818 UNC93AQ86WB7 457 aa20■□□□□ 0.79
SF3A1-205ENST00000463818 OVCA2Q8WZ82 227 aa20■□□□□ 0.79
SF3A1-205ENST00000463818 SMARCD1Q96GM5 515 aa20■□□□□ 0.79
SF3A1-205ENST00000463818 SMOQ99835 787 aa20■□□□□ 0.79
SF3A1-205ENST00000463818 CFAP97Q9P2B7 532 aa20■□□□□ 0.79
SF3A1-205ENST00000463818 HMGXB4Q9UGU5 601 aa20■□□□□ 0.79
SF3A1-205ENST00000463818 TRIM49P0CI25 452 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 TRIM49CP0CI26 452 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 KRT13P13646 458 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 CCDC130P13994 396 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 ASPAP45381 313 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 SLC5A3P53794 718 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 PPP3CAQ08209 521 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 FAM186BQ8IYM0 893 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 CAMKK1Q8N5S9 505 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 KIAA1958Q8N8K9 716 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 C12orf29Q8N999 325 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 ZMIZ2Q8NF64 920 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 RPLP0P6Q8NHW5 317 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 SLC2A14Q8TDB8 520 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 KRT82Q9NSB4 513 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 COMMD8Q9NX08 183 aa19.99■□□□□ 0.79
SF3A1-205ENST00000463818 ZNF638Q14966 1978 aaKnown RBP19.98■□□□□ 0.79
SF3A1-205ENST00000463818 CCDC163A0A0D9SF12 145 aa19.98■□□□□ 0.79
SF3A1-205ENST00000463818 PRR5-ARHGAP8B1AHC4 643 aa19.98■□□□□ 0.79
SF3A1-205ENST00000463818 SLC9A3R1O14745 358 aaPredicted RBP19.98■□□□□ 0.79
SF3A1-205ENST00000463818 SCAMP3O14828 347 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms