RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 CHST13Q8NET6 341 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 OLIG1Q8TAK6 271 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 DTX3LQ8TDB6 740 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 TBCKQ8TEA7 893 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 USP33Q8TEY7 942 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 ZFPM2Q8WW38 1151 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 TUBB6Q9BUF5 446 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 FGFBP2Q9BYJ0 223 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 SPATC1LQ9H0A9 340 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 SLCO1B3Q9NPD5 702 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 RNF146Q9NTX7 359 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 ETNK2Q9NVF9 386 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 WHRNQ9P202 907 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 FBXO10Q9UK96 956 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 AJAP1Q9UKB5 411 aaPredicted RBP9.1□□□□□ -0.95
SHQ1-203ENST00000463369 PCDHA2Q9Y5H9 948 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 ALG6Q9Y672 507 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.1□□□□□ -0.95
SHQ1-203ENST00000463369 IGSF9BQ9UPX0 1349 aa9.1□□□□□ -0.95
SHQ1-203ENST00000463369 MIF4GDA9UHW6 222 aaKnown RBP9.09□□□□□ -0.95
SHQ1-203ENST00000463369 C2CD2LO14523 706 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 HNRNPRO43390 633 aaKnown RBP9.09□□□□□ -0.95
SHQ1-203ENST00000463369 CDH16O75309 829 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 ZWINTO95229 277 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 HNRNPCP07910 306 aaKnown RBP eCLIP9.09□□□□□ -0.95
SHQ1-203ENST00000463369 PABPC4LP0CB38 370 aaKnown RBP9.09□□□□□ -0.95
SHQ1-203ENST00000463369 PSMA3P25788 255 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 HOXA13P31271 388 aaPredicted RBP9.09□□□□□ -0.95
SHQ1-203ENST00000463369 TM4SF4P48230 202 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 ADCY1Q08828 1119 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 ITKQ08881 620 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 LAMC2Q13753 1193 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 SEPT6Q14141 434 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 MAP7Q14244 749 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 EPHA7Q15375 998 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 KYNUQ16719 465 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 DEFB115Q30KQ5 88 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 EDRF1Q3B7T1 1238 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 Q4G0T1 1027 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 TMEM119Q4V9L6 283 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 TMEM63BQ5T3F8 832 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 FAM180BQ6P0A1 224 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 RHBDF2Q6PJF5 856 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 MARK2Q7KZI7 788 aaKnown RBP9.09□□□□□ -0.95
SHQ1-203ENST00000463369 CLNKQ7Z7G1 428 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 C11orf74Q86VG3 221 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 TPH2Q8IWU9 490 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 ARL6IP6Q8N6S5 226 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 NKAIN3Q8N8D7 197 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 DENND1AQ8TEH3 1009 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 NAT14Q8WUY8 206 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 STMN2Q93045 179 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 LENG1Q96BZ8 264 aaPredicted RBP9.09□□□□□ -0.95
SHQ1-203ENST00000463369 VMP1Q96GC9 406 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 PARK7Q99497 189 aaKnown RBP9.09□□□□□ -0.95
SHQ1-203ENST00000463369 ANO3Q9BYT9 981 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 ACAD9Q9H845 621 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 TXNRD2Q9NNW7 524 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 SIX2Q9NPC8 291 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 TBC1D7Q9P0N9 293 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 TBK1Q9UHD2 729 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 PTPN22Q9Y2R2 807 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 UMODL1Q5DID0 1318 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 LRRC37A2A6NM11 1700 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 EDIL3O43854 480 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 EXOC3O60645 756 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 PEX10O60683 326 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 SLC25A27O95847 323 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 ITGA2BP08514 1039 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 PRKAR2AP13861 404 aaKnown RBP9.09□□□□□ -0.95
SHQ1-203ENST00000463369 ETS2P15036 469 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 ITIH2P19823 946 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 ABCB4P21439 1286 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 CHKAP35790 457 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 RXRGP48443 463 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 BPIFB3P59826 476 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 DEUP1Q05D60 604 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 TMEM62Q0P6H9 643 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 SREBF2Q12772 1141 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 GRM1Q13255 1194 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 DDR2Q16832 855 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 CYP4F22Q6NT55 531 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 NLRP9Q7RTR0 991 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 MTDHQ86UE4 582 aaKnown RBP9.09□□□□□ -0.95
SHQ1-203ENST00000463369 UBL4BQ8N7F7 174 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 THAP3Q8WTV1 239 aaPredicted RBP9.09□□□□□ -0.95
SHQ1-203ENST00000463369 SCFD1Q8WVM8 642 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 CRYGNQ8WXF5 182 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 PPP1R14BQ96C90 147 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 ARHGEF26Q96DR7 871 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 SLX1AQ9BQ83 275 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 RHBDL2Q9NX52 303 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 FBXO40Q9UH90 709 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 COG5Q9UP83 839 aa9.09□□□□□ -0.95
SHQ1-203ENST00000463369 MYH9P35579 1960 aaKnown RBP9.08□□□□□ -0.96
SHQ1-203ENST00000463369 A8MXQ7 604 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 RASA4BC9J798 803 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 IPO5O00410 1097 aaKnown RBP9.08□□□□□ -0.96
SHQ1-203ENST00000463369 GYG2O15488 501 aa9.08□□□□□ -0.96
SHQ1-203ENST00000463369 RASA4O43374 803 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms