RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 TRIM8Q9BZR9 551 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 ZCCHC4Q9H5U6 513 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 BARX1Q9HBU1 254 aaPredicted RBP8.16□□□□□ -1.1
UBE4B-204ENST00000462658 RNF146Q9NTX7 359 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 Q9UFV3 132 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 AGTPBP1Q9UPW5 1226 aa8.16□□□□□ -1.1
UBE4B-204ENST00000462658 OTOL1A6NHN0 477 aaPredicted RBP8.15□□□□□ -1.1
UBE4B-204ENST00000462658 C9orf118A6NHY6 69 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 POLR2DO15514 142 aaKnown RBP8.15□□□□□ -1.1
UBE4B-204ENST00000462658 PCDH8O95206 1070 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 HSPA1AP0DMV8 641 aaKnown RBP8.15□□□□□ -1.1
UBE4B-204ENST00000462658 HSPA1BP0DMV9 641 aaKnown RBP8.15□□□□□ -1.1
UBE4B-204ENST00000462658 CETPP11597 493 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 IBSPP21815 317 aaPredicted RBP8.15□□□□□ -1.1
UBE4B-204ENST00000462658 CIITAP33076 1130 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 TECP42680 631 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 GUCY2FP51841 1108 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 TMEM266Q2M3C6 531 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 KRTAP19-4Q3LI73 84 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 LONRF3Q496Y0 759 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 Q4G0T1 1027 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 SPOCD1Q6ZMY3 1216 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 KRBA2Q6ZNG9 492 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 RNF207Q6ZRF8 634 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 RBM43Q6ZSC3 357 aaKnown RBP8.15□□□□□ -1.1
UBE4B-204ENST00000462658 PDILTQ8N807 584 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 CNNM3Q8NE01 707 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 OR5AN1Q8NGI8 311 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 AK8Q96MA6 479 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 KATNBL1Q9H079 304 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 TSPY26PQ9H489 355 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 MTG2Q9H4K7 406 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 PRDM12Q9H4Q4 367 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 FBXO10Q9UK96 956 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 ADAM29Q9UKF5 820 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 RIPK3Q9Y572 518 aa8.15□□□□□ -1.1
UBE4B-204ENST00000462658 FSD2A1L4K1 749 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 FAM86B1E9PN63 330 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 FOXN1O15353 648 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 HMGCRP04035 888 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 FAM86B2P0C5J1 330 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 CDC25AP30304 524 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 UBA7P41226 1012 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 ETV4P43268 484 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 MANFP55145 182 aaKnown RBP8.14□□□□□ -1.11
UBE4B-204ENST00000462658 BCAR1P56945 870 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 SCAND1P57086 179 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 RPS6P62753 249 aaKnown RBP8.14□□□□□ -1.11
UBE4B-204ENST00000462658 UBXN2AP68543 259 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 BAATQ14032 418 aaPredicted RBP8.14□□□□□ -1.11
UBE4B-204ENST00000462658 PDIA5Q14554 519 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 EIF4HQ15056 248 aaKnown RBP8.14□□□□□ -1.11
UBE4B-204ENST00000462658 PRR16Q569H4 304 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 CT83Q5H943 113 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 CCDC62Q6P9F0 684 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 SASS6Q6UVJ0 657 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 ELOA2Q8IYF1 753 aaPredicted RBP8.14□□□□□ -1.11
UBE4B-204ENST00000462658 CNTD1Q8N815 330 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 CHST13Q8NET6 341 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 HAS1Q92839 578 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 TAAR1Q96RJ0 339 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 PYM1Q9BRP8 204 aaKnown RBP8.14□□□□□ -1.11
UBE4B-204ENST00000462658 RAB34Q9BZG1 259 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 BRINP2Q9C0B6 783 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 MAF1Q9H063 256 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 XYLT2Q9H1B5 865 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 ACAD9Q9H845 621 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 C14orf119Q9NWQ9 140 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 COL20A1Q9P218 1284 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 USP25Q9UHP3 1055 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 HOOK1Q9UJC3 728 aaKnown RBP8.14□□□□□ -1.11
UBE4B-204ENST00000462658 RABGAP1Q9Y3P9 1069 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 DUSP10Q9Y6W6 482 aa8.14□□□□□ -1.11
UBE4B-204ENST00000462658 RPTORQ8N122 1335 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 hCG_2014768A0A024R1R8 64 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 CCL15-CCL14A0A0B4J2E2 113 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 PP2D1A8MPX8 630 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 TBX3O15119 743 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 KATNA1O75449 491 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 CNMDO75829 334 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 CCDC192P0DO97 292 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 HUNKP57058 714 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 CCL15Q16663 113 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 DEFB115Q30KQ5 88 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 ARHGEF16Q5VV41 709 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 SLC30A10Q6XR72 485 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 PLA2G4DQ86XP0 818 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 REXO1L1PQ8IX06 675 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 KBTBD2Q8IY47 623 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 CEP57L1Q8IYX8 460 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 RPUSD2Q8IZ73 545 aaKnown RBP8.13□□□□□ -1.11
UBE4B-204ENST00000462658 IQUBQ8NA54 791 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 CYP2W1Q8TAV3 490 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 DHX58Q96C10 678 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 CCDC34Q96HJ3 373 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 AHCYL2Q96HN2 611 aaKnown RBP8.13□□□□□ -1.11
UBE4B-204ENST00000462658 CAPNS2Q96L46 248 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 FAM20AQ96MK3 541 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 RMDN3Q96TC7 470 aa8.13□□□□□ -1.11
UBE4B-204ENST00000462658 PAGR1Q9BTK6 254 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms