RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 AGAP11Q8TF27 550 aa17.71■□□□□ 0.43
ACTB-207ENST00000462494 ZNF75CPQ92670 426 aaPredicted RBP17.71■□□□□ 0.43
ACTB-207ENST00000462494 CHKBQ9Y259 395 aa17.71■□□□□ 0.43
ACTB-207ENST00000462494 LRRC37A2A6NM11 1700 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 H7C0C1 242 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 ZWINTO95229 277 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 C22orf31O95567 290 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 INSRRP14616 1297 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 CCNB1P14635 433 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 PDGFRAP16234 1089 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 ATP2A2P16615 1042 aaKnown RBP17.7■□□□□ 0.42
ACTB-207ENST00000462494 GPD1P21695 349 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 TARSP26639 723 aaKnown RBP17.7■□□□□ 0.42
ACTB-207ENST00000462494 GABRB2P47870 512 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 ATP5OP48047 213 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 NDST1P52848 882 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 GSCP56915 257 aaPredicted RBP17.7■□□□□ 0.42
ACTB-207ENST00000462494 GJC2Q5T442 439 aaPredicted RBP17.7■□□□□ 0.42
ACTB-207ENST00000462494 IGDCC3Q8IVU1 814 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 GIMAP7Q8NHV1 300 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.7■□□□□ 0.42
ACTB-207ENST00000462494 TCP10LQ8TDR4 215 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 RXFP2Q8WXD0 754 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 PIWIL1Q96J94 861 aaKnown RBP17.7■□□□□ 0.42
ACTB-207ENST00000462494 TXLNGQ9NUQ3 528 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 RBPJLQ9UBG7 517 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 MCM3APO60318 1980 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 E5RJQ4 531 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 E7ESA3 106 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 VTNP04004 478 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 HMGCRP04035 888 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 VDRP11473 427 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 ALDH3A1P30838 453 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 ELK3P41970 407 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 ZNF143P52747 638 aaPredicted RBP17.7■□□□□ 0.42
ACTB-207ENST00000462494 YARSP54577 528 aaKnown RBP17.7■□□□□ 0.42
ACTB-207ENST00000462494 TNFAIP2Q03169 654 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 SCYL2Q6P3W7 929 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 MOB2Q70IA6 237 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 OTOAQ7RTW8 1153 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 CXorf38Q8TB03 319 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 DCAKDQ8WVC6 231 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 STAMBPL1Q96FJ0 436 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 PDZD7Q9H5P4 517 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 ERAP1Q9NZ08 941 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 MCM8Q9UJA3 840 aa17.7■□□□□ 0.42
ACTB-207ENST00000462494 PRPSAP2O60256 369 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 MCF2P10911 925 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 ATICP31939 592 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 RGS7P49802 495 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 ATP11AP98196 1134 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 KRT81Q14533 505 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 TTLL4Q14679 1199 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 TMEM132DQ14C87 1099 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 ACAP1Q15027 740 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 SLC10A6Q3KNW5 377 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 ACCSLQ4AC99 568 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 FAM183BPQ6ZVS7 135 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 SULF1Q8IWU6 871 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 C12orf29Q8N999 325 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 DCPSQ96C86 337 aaKnown RBP17.69■□□□□ 0.42
ACTB-207ENST00000462494 TMEM237Q96Q45 408 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 PHACTR1Q9C0D0 580 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 CYP3A43Q9HB55 503 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 ALG13Q9NP73 1137 aaKnown RBP17.69■□□□□ 0.42
ACTB-207ENST00000462494 NPHS2Q9NP85 383 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 FETUBQ9UGM5 382 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 HAO1Q9UJM8 370 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 TSPAN16Q9UKR8 245 aa17.69■□□□□ 0.42
ACTB-207ENST00000462494 AVILO75366 819 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 PCK1P35558 622 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 SKIV2L2P42285 1042 aaKnown RBP17.68■□□□□ 0.42
ACTB-207ENST00000462494 IREB2P48200 963 aaKnown RBP17.68■□□□□ 0.42
ACTB-207ENST00000462494 YWHAGP61981 247 aaKnown RBP eCLIP17.68■□□□□ 0.421e-10■□□□□ 9.7
ACTB-207ENST00000462494 TRNP1Q6NT89 227 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 FAF2Q96CS3 445 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 NCAPGQ9BPX3 1015 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 CNPY3Q9BT09 278 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 DHRS4Q9BTZ2 278 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 SLC17A7Q9P2U7 560 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 BARX2Q9UMQ3 279 aaPredicted RBP17.68■□□□□ 0.42
ACTB-207ENST00000462494 IKBKGQ9Y6K9 419 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 PCNTO95613 3336 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 A0A1B0GUA9 196 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 DCTN3O75935 186 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 MAP3K6O95382 1288 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 ARF4P18085 180 aaPredicted RBP17.68■□□□□ 0.42
ACTB-207ENST00000462494 CYP3A5P20815 502 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 NOMO1Q15155 1222 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 AMHR2Q16671 573 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 ZNF449Q6P9G9 518 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 ILDR2Q71H61 639 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 NLGN2Q8NFZ4 835 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 C10orf82Q8WW14 230 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 CYTH2Q99418 400 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 YY1AP1Q9H869 796 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 SSU72Q9NP77 194 aaKnown RBP17.68■□□□□ 0.42
ACTB-207ENST00000462494 GPATCH2LQ9NWQ4 482 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 HEY1Q9Y5J3 304 aa17.68■□□□□ 0.42
ACTB-207ENST00000462494 DNAJC25-GNG10A0A024R161 153 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms