RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 DESP17661 470 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 RPL17P18621 184 aaKnown RBP11.24□□□□□ -0.61
RTF1-202ENST00000462276 DNAJB1P25685 340 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 HOXA9P31269 272 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 CAMK1Q14012 370 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 VEPH1Q14D04 833 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 MGAT5BQ3V5L5 792 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 EFHC1Q5JVL4 640 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 PM20D1Q6GTS8 502 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 MMS22LQ6ZRQ5 1243 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 NUP93Q8N1F7 819 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 ARHGAP18Q8N392 663 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 ZMIZ2Q8NF64 920 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 ZNF653Q96CK0 615 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 MRPL38Q96DV4 380 aaKnown RBP11.24□□□□□ -0.61
RTF1-202ENST00000462276 MCRS1Q96EZ8 462 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 KCNK16Q96T55 309 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 NCAPGQ9BPX3 1015 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 C11orf70Q9BRQ4 267 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 THAP2Q9H0W7 228 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 CYP4F11Q9HBI6 524 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 IL37Q9NZH6 218 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 MYO1AQ9UBC5 1043 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 CNOT8Q9UFF9 292 aaKnown RBP11.24□□□□□ -0.61
RTF1-202ENST00000462276 USP3Q9Y6I4 520 aa11.24□□□□□ -0.61
RTF1-202ENST00000462276 SIGLEC16A6NMB1 481 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 HHLA1C9JL84 531 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 E5RJQ4 531 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 TNFRSF10BO14763 440 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 TGM5O43548 720 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 ZBED1O96006 694 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 POU2F2P09086 479 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 CSH1P0DML2 217 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 CSH2P0DML3 217 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 KRT3P12035 628 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 ABCB4P21439 1286 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 RRM1P23921 792 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 CA8P35219 290 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 ARHGAP25P42331 645 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 PPP3CCP48454 512 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 PSEN1P49768 467 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 TKTL1P51854 596 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 EPHB3P54753 998 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 SLC6A3Q01959 620 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 MAMLD1Q13495 774 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 PLPP4Q5VZY2 271 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 DNAJC24Q6P3W2 148 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 DENND5BQ6ZUT9 1274 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 SLC26A9Q7LBE3 791 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 ITIH5Q86UX2 942 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 MON1AQ86VX9 555 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 XYLT1Q86Y38 959 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 SCN4BQ8IWT1 228 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 FNIP1Q8TF40 1166 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 AUTS2Q8WXX7 1259 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 GOLGA1Q92805 767 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 PGLYRP2Q96PD5 576 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 SEPT5Q99719 369 aaPredicted RBP11.23□□□□□ -0.61
RTF1-202ENST00000462276 ZNF576Q9H609 170 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 CYTH4Q9UIA0 394 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 FBXW11Q9UKB1 542 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 SCML2Q9UQR0 700 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 NCANO14594 1321 aa11.23□□□□□ -0.61
RTF1-202ENST00000462276 LAMA2P24043 3122 aaKnown RBP11.22□□□□□ -0.61
RTF1-202ENST00000462276 TCRBV5S1A1TA0A578 114 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 FAM92AA1XBS5 289 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 HIDE1A8MVS5 230 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 KIF2AO00139 706 aaPredicted RBP11.22□□□□□ -0.61
RTF1-202ENST00000462276 MYO1FO00160 1098 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 TULP2O00295 520 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 PAPSS1O43252 624 aaPredicted RBP11.22□□□□□ -0.61
RTF1-202ENST00000462276 NCK2O43639 380 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 KIF5CO60282 957 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 HSF2BPO75031 334 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 BEST1O76090 585 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 VNN2O95498 520 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 FGF19O95750 216 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 ERBB2P04626 1255 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 HNRNPA1P09651 372 aaKnown RBP eCLIP11.22□□□□□ -0.61
RTF1-202ENST00000462276 YWHAQP27348 245 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 SSTR3P32745 418 aaPredicted RBP11.22□□□□□ -0.61
RTF1-202ENST00000462276 RGS7P49802 495 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 CLCN4P51793 760 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 SLC5A3P53794 718 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 MRPS5P82675 430 aaKnown RBP11.22□□□□□ -0.61
RTF1-202ENST00000462276 ACAP1Q15027 740 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 DDR2Q16832 855 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 CCDC142Q17RM4 750 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 OR6B2Q6IFH4 312 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 DCUN1D2Q6PH85 259 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 REXO1L1PQ8IX06 675 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 SCUBE3Q8IX30 993 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 SYCE1Q8N0S2 351 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 KREMEN2Q8NCW0 462 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 PDZD8Q8NEN9 1154 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 SLC35G2Q8TBE7 412 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 FEZF2Q8TBJ5 459 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 OVCA2Q8WZ82 227 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 MYRFLQ96LU7 910 aa11.22□□□□□ -0.61
RTF1-202ENST00000462276 SELENOOQ9BVL4 669 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms