RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 SHROOM3Q8TF72 1996 aa16.35■□□□□ 0.21
APP-211ENST00000462267 NDUFS2O75306 463 aa16.35■□□□□ 0.21
APP-211ENST00000462267 ADH5P11766 374 aa16.35■□□□□ 0.21
APP-211ENST00000462267 PNPLA4P41247 253 aa16.35■□□□□ 0.21
APP-211ENST00000462267 TRAPPC10P48553 1259 aa16.35■□□□□ 0.21
APP-211ENST00000462267 KDSRQ06136 332 aa16.35■□□□□ 0.21
APP-211ENST00000462267 CAMK2BQ13554 666 aa16.35■□□□□ 0.21
APP-211ENST00000462267 PREPLQ4J6C6 727 aaPredicted RBP16.35■□□□□ 0.21
APP-211ENST00000462267 NUDT18Q6ZVK8 323 aa16.35■□□□□ 0.21
APP-211ENST00000462267 CENPQQ7L2Z9 268 aaPredicted RBP16.35■□□□□ 0.21
APP-211ENST00000462267 SPATA2LQ8IUW3 424 aaPredicted RBP16.35■□□□□ 0.21
APP-211ENST00000462267 PHTF2Q8N3S3 785 aa16.35■□□□□ 0.21
APP-211ENST00000462267 PDCL2Q8N4E4 241 aa16.35■□□□□ 0.21
APP-211ENST00000462267 PDCD7Q8N8D1 485 aaKnown RBP16.35■□□□□ 0.21
APP-211ENST00000462267 ZNF513Q8N8E2 541 aaPredicted RBP16.35■□□□□ 0.21
APP-211ENST00000462267 PKMYT1Q99640 499 aa16.35■□□□□ 0.21
APP-211ENST00000462267 TOR4AQ9NXH8 423 aa16.35■□□□□ 0.21
APP-211ENST00000462267 DDX43Q9NXZ2 648 aaKnown RBP16.35■□□□□ 0.21
APP-211ENST00000462267 TRPM5Q9NZQ8 1165 aa16.35■□□□□ 0.21
APP-211ENST00000462267 CYP8B1Q9UNU6 501 aa16.35■□□□□ 0.21
APP-211ENST00000462267 ANAPC1Q9H1A4 1944 aa16.35■□□□□ 0.21
APP-211ENST00000462267 TBC1D3BA6NDS4 549 aa16.34■□□□□ 0.21
APP-211ENST00000462267 E9PAM4 449 aa16.34■□□□□ 0.21
APP-211ENST00000462267 HOXB2P14652 356 aa16.34■□□□□ 0.21
APP-211ENST00000462267 NTSR1P30989 418 aa16.34■□□□□ 0.21
APP-211ENST00000462267 MAGEA11P43364 429 aa16.34■□□□□ 0.21
APP-211ENST00000462267 MYL7Q01449 175 aa16.34■□□□□ 0.21
APP-211ENST00000462267 POU5F1Q01860 360 aaKnown RBP16.34■□□□□ 0.21
APP-211ENST00000462267 SCN4BQ8IWT1 228 aa16.34■□□□□ 0.21
APP-211ENST00000462267 TMEM86AQ8N2M4 240 aa16.34■□□□□ 0.21
APP-211ENST00000462267 KCTD17Q8N5Z5 321 aa16.34■□□□□ 0.21
APP-211ENST00000462267 SYT2Q8N9I0 419 aaPredicted RBP16.34■□□□□ 0.21
APP-211ENST00000462267 BAHD1Q8TBE0 780 aaPredicted RBP16.34■□□□□ 0.21
APP-211ENST00000462267 CEP295NLQ96MC4 621 aa16.34■□□□□ 0.21
APP-211ENST00000462267 FOXP1Q9H334 677 aaPredicted RBP16.34■□□□□ 0.21
APP-211ENST00000462267 TBC1D14Q9P2M4 693 aa16.34■□□□□ 0.21
APP-211ENST00000462267 GTF3C4Q9UKN8 822 aa16.34■□□□□ 0.21
APP-211ENST00000462267 NFE2L3Q9Y4A8 694 aa16.34■□□□□ 0.21
APP-211ENST00000462267 A0A1B0GTW7 788 aa16.33■□□□□ 0.2
APP-211ENST00000462267 A0A1W2PQF6 199 aa16.33■□□□□ 0.2
APP-211ENST00000462267 PP2D1A8MPX8 630 aa16.33■□□□□ 0.2
APP-211ENST00000462267 CYSRT1A8MQ03 144 aa16.33■□□□□ 0.2
APP-211ENST00000462267 JAK2O60674 1132 aa16.33■□□□□ 0.2
APP-211ENST00000462267 ATXN1LP0C7T5 689 aaKnown RBP16.33■□□□□ 0.2
APP-211ENST00000462267 ACAT1P24752 427 aaKnown RBP16.33■□□□□ 0.2
APP-211ENST00000462267 PPP3CCP48454 512 aa16.33■□□□□ 0.2
APP-211ENST00000462267 GUCY1B3Q02153 619 aa16.33■□□□□ 0.2
APP-211ENST00000462267 ME3Q16798 604 aa16.33■□□□□ 0.2
APP-211ENST00000462267 ZNF843Q8N446 348 aa16.33■□□□□ 0.2
APP-211ENST00000462267 SPATA17Q96L03 361 aa16.33■□□□□ 0.2
APP-211ENST00000462267 DCBLD2Q96PD2 775 aa16.33■□□□□ 0.2
APP-211ENST00000462267 PRORYQ9H606 182 aa16.33■□□□□ 0.2
APP-211ENST00000462267 EHD2Q9NZN4 543 aa16.33■□□□□ 0.2
APP-211ENST00000462267 L1RE1Q9UN81 338 aa16.33■□□□□ 0.2
APP-211ENST00000462267 CPQQ9Y646 472 aa16.33■□□□□ 0.2
APP-211ENST00000462267 HELZP42694 1942 aaKnown RBP16.33■□□□□ 0.2
APP-211ENST00000462267 HUS1O60921 280 aa16.32■□□□□ 0.2
APP-211ENST00000462267 CER1O95813 267 aa16.32■□□□□ 0.2
APP-211ENST00000462267 OLFM2O95897 454 aa16.32■□□□□ 0.2
APP-211ENST00000462267 NDUFV2P19404 249 aa16.32■□□□□ 0.2
APP-211ENST00000462267 ACOT2P49753 483 aa16.32■□□□□ 0.2
APP-211ENST00000462267 GAD2Q05329 585 aa16.32■□□□□ 0.2
APP-211ENST00000462267 TCHHQ07283 1943 aa16.32■□□□□ 0.2
APP-211ENST00000462267 BTBD8Q5XKL5 378 aa16.32■□□□□ 0.2
APP-211ENST00000462267 SDE2Q6IQ49 451 aa16.32■□□□□ 0.2
APP-211ENST00000462267 IL27RAQ6UWB1 636 aa16.32■□□□□ 0.2
APP-211ENST00000462267 DBX2Q6ZNG2 339 aa16.32■□□□□ 0.2
APP-211ENST00000462267 DDX42Q86XP3 938 aaKnown RBP eCLIP16.32■□□□□ 0.2
APP-211ENST00000462267 NT5DC4Q86YG4 428 aa16.32■□□□□ 0.2
APP-211ENST00000462267 ETFBKMTQ8IXQ9 262 aa16.32■□□□□ 0.2
APP-211ENST00000462267 PIP4K2CQ8TBX8 421 aa16.32■□□□□ 0.2
APP-211ENST00000462267 DNASE2BQ8WZ79 361 aa16.32■□□□□ 0.2
APP-211ENST00000462267 OTUB2Q96DC9 234 aa16.32■□□□□ 0.2
APP-211ENST00000462267 MMTAG2Q9BU76 263 aaKnown RBP16.32■□□□□ 0.2
APP-211ENST00000462267 RNF38Q9H0F5 515 aa16.32■□□□□ 0.2
APP-211ENST00000462267 GAREM1Q9H706 876 aa16.32■□□□□ 0.2
APP-211ENST00000462267 TM7SF3Q9NS93 570 aa16.32■□□□□ 0.2
APP-211ENST00000462267 SMPD4Q9NXE4 827 aa16.32■□□□□ 0.2
APP-211ENST00000462267 CFAP97Q9P2B7 532 aa16.32■□□□□ 0.2
APP-211ENST00000462267 DEC1Q9P2X7 70 aa16.32■□□□□ 0.2
APP-211ENST00000462267 NOL7Q9UMY1 257 aaKnown RBP16.32■□□□□ 0.2
APP-211ENST00000462267 STARD13Q9Y3M8 1113 aa16.32■□□□□ 0.2
APP-211ENST00000462267 PCDHGB2Q9Y5G2 931 aa16.32■□□□□ 0.2
APP-211ENST00000462267 MYH11P35749 1972 aa16.31■□□□□ 0.2
APP-211ENST00000462267 ZNF840PA6NDX5 716 aa16.31■□□□□ 0.2
APP-211ENST00000462267 CAPN8A6NHC0 703 aa16.31■□□□□ 0.2
APP-211ENST00000462267 J3QKU1 62 aa16.31■□□□□ 0.2
APP-211ENST00000462267 CAPN9O14815 690 aa16.31■□□□□ 0.2
APP-211ENST00000462267 SCAMP3O14828 347 aaKnown RBP16.31■□□□□ 0.2
APP-211ENST00000462267 FLRT2O43155 660 aa16.31■□□□□ 0.2
APP-211ENST00000462267 MAOBP27338 520 aa16.31■□□□□ 0.2
APP-211ENST00000462267 PCSK1P29120 753 aa16.31■□□□□ 0.2
APP-211ENST00000462267 MATKP42679 507 aa16.31■□□□□ 0.2
APP-211ENST00000462267 SLC12A3P55017 1021 aa16.31■□□□□ 0.2
APP-211ENST00000462267 LY6G5CQ5SRR4 150 aa16.31■□□□□ 0.2
APP-211ENST00000462267 LARP1BQ659C4 914 aaKnown RBP16.31■□□□□ 0.2
APP-211ENST00000462267 SLC39A4Q6P5W5 647 aa16.31■□□□□ 0.2
APP-211ENST00000462267 VSTM1Q6UX27 236 aa16.31■□□□□ 0.2
APP-211ENST00000462267 C4orf50Q6ZRC1 276 aa16.31■□□□□ 0.2
APP-211ENST00000462267 DENND5BQ6ZUT9 1274 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms