RNA–Protein interactions for RNA: ENST00000461819.5

CCDC28B-203, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 5

Gene CCDC28B, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-203ENST00000461819 CALCAP01258 141 aa24.14■■□□□ 1.45
CCDC28B-203ENST00000461819 KLK7P49862 253 aa24.14■■□□□ 1.45
CCDC28B-203ENST00000461819 TAF10Q12962 218 aa24.14■■□□□ 1.45
CCDC28B-203ENST00000461819 SYCP1Q15431 976 aa24.14■■□□□ 1.45
CCDC28B-203ENST00000461819 LRSAM1Q6UWE0 723 aa24.14■■□□□ 1.45
CCDC28B-203ENST00000461819 TTC30AQ86WT1 665 aa24.14■■□□□ 1.45
CCDC28B-203ENST00000461819 KHSRPQ92945 711 aaKnown RBP eCLIP24.14■■□□□ 1.45
CCDC28B-203ENST00000461819 FBXO44Q9H4M3 255 aa24.14■■□□□ 1.45
CCDC28B-203ENST00000461819 PLCB1Q9NQ66 1216 aa24.14■■□□□ 1.45
CCDC28B-203ENST00000461819 FAM207AQ9NSI2 230 aaPredicted RBP24.14■■□□□ 1.45
CCDC28B-203ENST00000461819 COMMD8Q9NX08 183 aa24.14■■□□□ 1.45
CCDC28B-203ENST00000461819 M0QYV0 167 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 ABL1P00519 1130 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 SERPINC1P01008 464 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 ALADP13716 330 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 UCHL3P15374 230 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 GNA15P30679 374 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 PPP3CCP48454 512 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 BST2Q10589 180 aaKnown RBP24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 TDGQ13569 410 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 TXNDC8Q6A555 127 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 DPY19L2P1Q6NXN4 242 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 LCLAT1Q6UWP7 414 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 GPRIN1Q7Z2K8 1008 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 MAB21L3Q8N8X9 362 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 PDZD8Q8NEN9 1154 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 ZFP14Q9HCL3 533 aa24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.13■■□□□ 1.45
CCDC28B-203ENST00000461819 HHLA1C9JL84 531 aa24.12■■□□□ 1.45
CCDC28B-203ENST00000461819 THAP12O43422 761 aa24.12■■□□□ 1.45
CCDC28B-203ENST00000461819 MED7O43513 233 aa24.12■■□□□ 1.45
CCDC28B-203ENST00000461819 AVPR1AP37288 418 aa24.12■■□□□ 1.45
CCDC28B-203ENST00000461819 PDE4CQ08493 712 aa24.12■■□□□ 1.45
CCDC28B-203ENST00000461819 DRAP1Q14919 205 aaPredicted RBP24.12■■□□□ 1.45
CCDC28B-203ENST00000461819 CNGA2Q16280 664 aa24.12■■□□□ 1.45
CCDC28B-203ENST00000461819 NEK11Q8NG66 645 aa24.12■■□□□ 1.45
CCDC28B-203ENST00000461819 UBA3Q8TBC4 463 aa24.12■■□□□ 1.45
CCDC28B-203ENST00000461819 SLC46A2Q9BY10 475 aa24.12■■□□□ 1.45
CCDC28B-203ENST00000461819 GANQ9H2C0 597 aa24.12■■□□□ 1.45
CCDC28B-203ENST00000461819 SIK3Q9Y2K2 1263 aa24.12■■□□□ 1.45
CCDC28B-203ENST00000461819 XPO1O14980 1071 aaKnown RBP24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 ECI2O75521 394 aa24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 PNMA6AP0CW24 399 aaPredicted RBP24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 SETSIPP0DME0 302 aa24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 FCARP24071 287 aa24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 SMYD5Q6GMV2 418 aa24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 TANGO2Q6ICL3 276 aa24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 PIGZQ86VD9 579 aa24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 MON1AQ86VX9 555 aa24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 ARID3BQ8IVW6 561 aaPredicted RBP24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 SLC44A3Q8N4M1 653 aa24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 OVCA2Q8WZ82 227 aa24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 ELSPBP1Q96BH3 223 aa24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 ERGIC2Q96RQ1 377 aa24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 ZSWIM1Q9BR11 485 aa24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 RPP25Q9BUL9 199 aaKnown RBP24.11■■□□□ 1.45
CCDC28B-203ENST00000461819 TRAV19A0A0A6YYK7 116 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 SOBPA7XYQ1 873 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 FOXN3O00409 490 aaPredicted RBP24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 DPYSL4O14531 572 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 CYP26A1O43174 497 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 VIPR2P41587 438 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 POLR2FP61218 127 aaKnown RBP24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 PTK2Q05397 1052 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 GPIHBP1Q8IV16 184 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 UBALD2Q8IYN6 164 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 CMTM8Q8IZV2 173 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 NAA15Q9BXJ9 866 aaKnown RBP24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 UBXN6Q9BZV1 441 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 SMOC2Q9H3U7 446 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 TRPV4Q9HBA0 871 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 ACP6Q9NPH0 428 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 RTN4Q9NQC3 1192 aaKnown RBP24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 IL37Q9NZH6 218 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 GMIPQ9P107 970 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 DAAM1Q9Y4D1 1078 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 CUL9Q8IWT3 2517 aa24.1■■□□□ 1.45
CCDC28B-203ENST00000461819 C2orf78A6NCI8 922 aa24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 ZNF840PA6NDX5 716 aa24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 PRAMEF12O95522 483 aa24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 CKMP06732 381 aa24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 PDE6CP51160 858 aa24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 KIF11P52732 1056 aa24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 ZXDAP98168 799 aa24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 SECISBP2LQ93073 1101 aaKnown RBP24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 E2F7Q96AV8 911 aa24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 STK33Q9BYT3 514 aa24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 SMG9Q9H0W8 520 aaKnown RBP24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 NLRC4Q9NPP4 1024 aa24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 CHORDC1Q9UHD1 332 aaPredicted RBP24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 DUSP12Q9UNI6 340 aa24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 SCML2Q9UQR0 700 aa24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 NCANO14594 1321 aa24.09■■□□□ 1.45
CCDC28B-203ENST00000461819 FAM92AA1XBS5 289 aa24.08■■□□□ 1.45
CCDC28B-203ENST00000461819 F8VZ95 297 aa24.08■■□□□ 1.45
CCDC28B-203ENST00000461819 PI4K2BG5E9Z4 385 aa24.08■■□□□ 1.45
CCDC28B-203ENST00000461819 TULP2O00295 520 aa24.08■■□□□ 1.45
CCDC28B-203ENST00000461819 TEX33O43247 280 aa24.08■■□□□ 1.45
CCDC28B-203ENST00000461819 NARSO43776 548 aaKnown RBP24.08■■□□□ 1.45
CCDC28B-203ENST00000461819 USP17L7P0C7H9 530 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms