RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 MSANTD3Q96H12 275 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 ADPGKQ9BRR6 497 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 RNF26Q9BY78 433 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-206ENST00000461574 CYP4F11Q9HBI6 524 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 ZNF334Q9HCZ1 680 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-206ENST00000461574 FAM53CQ9NYF3 392 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 MTRRQ9UBK8 725 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 PCDHA4Q9UN74 947 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 CTNND2Q9UQB3 1225 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 FASNP49327 2511 aaKnown RBP5.54□□□□□ -1.52
BRCA1-206ENST00000461574 TRIP11Q15643 1979 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 FREM2Q5SZK8 3169 aa5.54□□□□□ -1.52
BRCA1-206ENST00000461574 NUP210Q8TEM1 1887 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-206ENST00000461574 LOC400499M0QZD8 3231 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 CCDC194A0A1B0GVG4 234 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 SLC38A8A6NNN8 435 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 N4BP3O15049 544 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 RPP40O75818 363 aaKnown RBP5.53□□□□□ -1.52
BRCA1-206ENST00000461574 RECQL4O94761 1208 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 KCNK5O95279 499 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 ZNF806P0C7X5 589 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 CHRNB1P11230 501 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 FCARP24071 287 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 TKTP29401 623 aaKnown RBP5.53□□□□□ -1.52
BRCA1-206ENST00000461574 MPLP40238 635 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 EXOSC10Q01780 885 aaKnown RBP5.53□□□□□ -1.52
BRCA1-206ENST00000461574 SPIRE1Q08AE8 756 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 ZNF252P-AS1Q0IIN9 211 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 PPP2R5CQ13362 524 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 CTTNQ14247 550 aaKnown RBP5.53□□□□□ -1.52
BRCA1-206ENST00000461574 DGKKQ5KSL6 1271 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 MOXD1Q6UVY6 613 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 VITQ6UXI7 678 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 Q6ZS52 159 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 Q6ZUG5 572 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 CACNA2D4Q7Z3S7 1137 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 HAUS6Q7Z4H7 955 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 TPH2Q8IWU9 490 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 C4orf19Q8IY42 314 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 BLIDQ8IZY5 108 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 GSTCDQ8NEC7 633 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 ZSCAN18Q8TBC5 510 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-206ENST00000461574 ETNPPLQ8TBG4 499 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 SMARCD2Q92925 531 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 DYDC2Q96IM9 177 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 ZNF512Q96ME7 567 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-206ENST00000461574 FAM20AQ96MK3 541 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 ASB16Q96NS5 453 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 EDEM2Q9BV94 578 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 ZSWIM4Q9H7M6 989 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 TRPV5Q9NQA5 729 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 SH3GLB2Q9NR46 395 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 ASAH2Q9NR71 780 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 RBM12Q9NTZ6 932 aaKnown RBP5.53□□□□□ -1.52
BRCA1-206ENST00000461574 PRMT7Q9NVM4 692 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-206ENST00000461574 SNTG2Q9NY99 539 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 WRAP73Q9P2S5 460 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-206ENST00000461574 GDAQ9Y2T3 454 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 INSL5Q9Y5Q6 135 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 EML5Q05BV3 1969 aa5.53□□□□□ -1.52
BRCA1-206ENST00000461574 SDK1Q7Z5N4 2213 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 CITO14578 2027 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 CYP3A7-CYP3A51PA0A087WV96 503 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 A0A1B0GUA9 196 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 WDR27A2RRH5 827 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 TMEM8BA6NDV4 472 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 SHISA7A6NL88 538 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 SPECC1L-ADORA2AF8WAN1 911 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 I3L4J1 428 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 K7ESF4 209 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 PTGESO14684 152 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 CPLX1O14810 134 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 TBX3O15119 743 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 SLC37A4O43826 429 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 CCNT1O60563 726 aaKnown RBP5.52□□□□□ -1.53
BRCA1-206ENST00000461574 USO1O60763 962 aaKnown RBP5.52□□□□□ -1.53
BRCA1-206ENST00000461574 EPN2O95208 641 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 BAG4O95429 457 aaKnown RBP5.52□□□□□ -1.53
BRCA1-206ENST00000461574 GCFC2P16383 781 aaKnown RBP5.52□□□□□ -1.53
BRCA1-206ENST00000461574 NME2P22392 152 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 CYP3A7P24462 503 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 CFPP27918 469 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 VIPR2P41587 438 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 RAP1GAPP47736 663 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 PXNP49023 591 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-206ENST00000461574 CLCNKBP51801 687 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 ROR1Q01973 937 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 POU5F1BQ06416 359 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 SSRP1Q08945 709 aaKnown RBP5.52□□□□□ -1.53
BRCA1-206ENST00000461574 PRPF4BQ13523 1007 aaKnown RBP5.52□□□□□ -1.53
BRCA1-206ENST00000461574 EPHA7Q15375 998 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 ELF2Q15723 593 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 INF2Q27J81 1249 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 ADCK5Q3MIX3 580 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 GLRA4Q5JXX5 417 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 DAB2IPQ5VWQ8 1189 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 BLOC1S2Q6QNY1 142 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 B3GNT9Q6UX72 402 aa5.52□□□□□ -1.53
BRCA1-206ENST00000461574 MAEAQ7L5Y9 396 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms