RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 CCR3P51677 355 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 ADAM9Q13443 819 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 EML3Q32P44 896 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 ZCWPW2Q504Y3 356 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 ISM2Q6H9L7 571 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 FUKQ8N0W3 1084 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 SPEM1Q8N4L4 309 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 ZMIZ2Q8NF64 920 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 OSCP1Q8WVF1 389 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 JAKMIP2Q96AA8 810 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 SEMA4AQ9H3S1 761 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 ECT2Q9H8V3 914 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 KRT82Q9NSB4 513 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 CHORDC1Q9UHD1 332 aaPredicted RBP16.48■□□□□ 0.23
NUP50-213ENST00000461437 SMG5Q9UPR3 1016 aaKnown RBP16.48■□□□□ 0.23
NUP50-213ENST00000461437 PCDHGA2Q9Y5H1 932 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 DCHS1Q96JQ0 3298 aa16.48■□□□□ 0.23
NUP50-213ENST00000461437 ZNF292O60281 2723 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 K7ESF4 209 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 LEFTY2O00292 366 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 AP1G2O75843 785 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 FAM163BP0C2L3 166 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 CD58P19256 250 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 ADORA2BP29275 332 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 PXNP49023 591 aaPredicted RBP16.47■□□□□ 0.23
NUP50-213ENST00000461437 PGFP49763 221 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 GALK1P51570 392 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 NOP14P78316 857 aaKnown RBP16.47■□□□□ 0.23
NUP50-213ENST00000461437 SGSM1Q2NKQ1 1148 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 TMEM196Q5HYL7 178 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 DGKKQ5KSL6 1271 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 ENGASEQ8NFI3 743 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 SLC2A14Q8TDB8 520 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 TMEM174Q8WUU8 243 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 EZH1Q92800 747 aaPredicted RBP16.47■□□□□ 0.23
NUP50-213ENST00000461437 FBXO32Q969P5 355 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 SMOQ99835 787 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 ARHGAP26Q9UNA1 814 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 CPQQ9Y646 472 aa16.47■□□□□ 0.23
NUP50-213ENST00000461437 MYO18AQ92614 2054 aaKnown RBP16.47■□□□□ 0.23
NUP50-213ENST00000461437 TRIM49BA6NDI0 452 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 SOBPA7XYQ1 873 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 RNF40O75150 1001 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 KIF20AO95235 890 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 OAS1P00973 400 aaKnown RBP16.46■□□□□ 0.23
NUP50-213ENST00000461437 YWHAQP27348 245 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 PRCPP42785 496 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 SLC5A3P53794 718 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 PMS1P54277 932 aaKnown RBP16.46■□□□□ 0.23
NUP50-213ENST00000461437 MAP3K7CLP57077 242 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 PDGFRLQ15198 375 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 GPRIN1Q7Z2K8 1008 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 NUP93Q8N1F7 819 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 RUBCNQ92622 972 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 SEMA4DQ92854 862 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 WBP2Q969T9 261 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 GMIPQ9P107 970 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 NCDNQ9UBB6 729 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 DMXL1Q9Y485 3027 aa16.46■□□□□ 0.23
NUP50-213ENST00000461437 TRDMT1O14717 391 aaKnown RBP16.45■□□□□ 0.22
NUP50-213ENST00000461437 TNFRSF10BO14763 440 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 IKBKBO14920 756 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 MBL2P11226 248 aaPredicted RBP16.45■□□□□ 0.22
NUP50-213ENST00000461437 KRT13P13646 458 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 PSMC2P35998 433 aaKnown RBP16.45■□□□□ 0.22
NUP50-213ENST00000461437 NFIL3Q16649 462 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 C1orf228Q6PIY5 440 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 PRR23BQ6ZRT6 265 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 INTS8Q75QN2 995 aaKnown RBP16.45■□□□□ 0.22
NUP50-213ENST00000461437 FILIP1Q7Z7B0 1213 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 CPA6Q8N4T0 437 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 SMARCD1Q96GM5 515 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 TNIP3Q96KP6 325 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 SLITRK1Q96PX8 696 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 P2RY13Q9BPV8 354 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 EPC1Q9H2F5 836 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 CCSER2Q9H7U1 834 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 DMAP1Q9NPF5 467 aaPredicted RBP16.45■□□□□ 0.22
NUP50-213ENST00000461437 CFAP97Q9P2B7 532 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 ATP8B3O60423 1300 aa16.45■□□□□ 0.22
NUP50-213ENST00000461437 CEP250Q9BV73 2442 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 GOLGA6L4A6NEF3 574 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 MAPK13O15264 365 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 COCHO43405 550 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 HRO43593 1189 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 OLFM2O95897 454 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 P4HA1P13674 534 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 NUCB2P80303 420 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 GRSF1Q12849 480 aaKnown RBP eCLIP16.44■□□□□ 0.22
NUP50-213ENST00000461437 GAB4Q2WGN9 574 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 ZNF394Q53GI3 561 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 SFTPA1Q8IWL2 248 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 WHAMMQ8TF30 809 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 TAF4BQ92750 862 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 ATP2A3Q93084 1043 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 IER2Q9BTL4 223 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 PCDHA5Q9Y5H7 936 aa16.44■□□□□ 0.22
NUP50-213ENST00000461437 GADD45BO75293 160 aaPredicted RBP16.43■□□□□ 0.22
NUP50-213ENST00000461437 CYP17A1P05093 508 aa16.43■□□□□ 0.22
NUP50-213ENST00000461437 IRF1P10914 325 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms