RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 GALNTL6Q49A17 601 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 FAM71DQ8N9W8 422 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 SLC20A1Q8WUM9 679 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 APBB2Q92870 758 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 HPS3Q969F9 1004 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 L3MBTL3Q96JM7 780 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 UBA2Q9UBT2 640 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 LNPEPQ9UIQ6 1025 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 MINPP1Q9UNW1 487 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 ATF5Q9Y2D1 282 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 BIVM-ERCC5R4GMW8 1640 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 NPHP3-ACAD11A0A0J9YXS1 232 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 IQCA1LA6NCM1 817 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 TM9SF1O15321 606 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 FAM20BO75063 409 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 SKAP2O75563 359 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 NFICP08651 508 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 NCAM1P13591 858 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 AKR1B1P15121 316 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 NQO1P15559 274 aaKnown RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 STX4Q12846 297 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 DDX39BQ13838 428 aaKnown RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 OASLQ15646 514 aaKnown RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 TAB1Q15750 504 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 SEL1L3Q68CR1 1132 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 GPAT2Q6NUI2 795 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 KCTD10Q9H3F6 313 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 COPG2Q9UBF2 871 aa9.3□□□□□ -0.92
BRCA1-205ENST00000461221 RUVBL2Q9Y230 463 aaKnown RBP9.3□□□□□ -0.92
BRCA1-205ENST00000461221 H7C4K7 107 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 O00370 1275 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 ZNF682O95780 498 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 EGFRP00533 1210 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 ODC1P11926 461 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 ITGALP20701 1170 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 TARSP26639 723 aaKnown RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 SERPINB5P36952 375 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 MARCH10Q8NA82 808 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 ATG16L2Q8NAA4 619 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 OR2W6PQ8NHA6 318 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 TMEM143Q96AN5 459 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 PNKPQ96T60 521 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 AAASQ9NRG9 546 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 TAGLN3Q9UI15 199 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 PADI4Q9UM07 663 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 PNMA8CA0A1B0GUJ8 204 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 CPSF4O95639 269 aaKnown RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 ECDO95905 644 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 PABPC1P11940 636 aaKnown RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 CALB2P22676 271 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 ZNF284Q2VY69 593 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 TMEM26Q6ZUK4 368 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 SLC44A2Q8IWA5 706 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 TRMT2AQ8IZ69 625 aaKnown RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 LPAR1Q92633 364 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 FAM120BQ96EK7 910 aaKnown RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 PPP1R10Q96QC0 940 aaKnown RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 REEP2Q9BRK0 252 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 KIFC1Q9BW19 673 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 GALNT8Q9NY28 637 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 DUSP12Q9UNI6 340 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 CTTNBP2Q8WZ74 1663 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 ZNF608Q9ULD9 1512 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 MEI4A8MW99 385 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 TBC1D12O60347 775 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 RNASEH1O60930 286 aaKnown RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 MAD2L1Q13257 205 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 MTF1Q14872 753 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 CRYMQ14894 314 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 C2CD6Q53TS8 623 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 DGKKQ5KSL6 1271 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 SLC25A24Q6NUK1 477 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 CDC73Q6P1J9 531 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 KDM7AQ6ZMT4 941 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 SYNE4Q8N205 404 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 C1orf131Q8NDD1 294 aaKnown RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 OSCP1Q8WVF1 389 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 FAM111AQ96PZ2 611 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 KCTD14Q9BQ13 255 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 NAT9Q9BTE0 207 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 HEY2Q9UBP5 337 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 F5H5T6 163 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 CLPTM1O96005 669 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 TAF6P49848 677 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 CSNK2BP67870 215 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 TSNQ15631 228 aaKnown RBP9.29□□□□□ -0.92
BRCA1-205ENST00000461221 SLC22A9Q8IVM8 553 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 SLC44A5Q8NCS7 719 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 SCUBE2Q9NQ36 999 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 FAM49BQ9NUQ9 324 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 AHSPQ9NZD4 102 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 DAPK2Q9UIK4 370 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 PNPLA7Q6ZV29 1317 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 C19orf81C9J6K1 198 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 IL6P05231 212 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 HSMCR30P0CW71 290 aa9.29□□□□□ -0.92
BRCA1-205ENST00000461221 ADRA2BP18089 450 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms