RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 GPR15P49685 360 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 TKTL1P51854 596 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 SDHAF4Q5VUM1 108 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 ZNF280DQ6N043 979 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 SPATA2LQ8IUW3 424 aaPredicted RBP17.69■□□□□ 0.42
NELFCD-201ENST00000460601 ATAD1Q8NBU5 361 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 NOA1Q8NC60 698 aaKnown RBP17.69■□□□□ 0.42
NELFCD-201ENST00000460601 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.69■□□□□ 0.42
NELFCD-201ENST00000460601 HSFY1Q96LI6 401 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 CSNK1G1Q9HCP0 422 aa17.69■□□□□ 0.42
NELFCD-201ENST00000460601 C2CD4BA6NLJ0 364 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 TADA3O75528 432 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 SOAT2O75908 522 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 PYGMP11217 842 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 ATP11AP98196 1134 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 C2orf54Q08AI8 447 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 CCDC181Q5TID7 509 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 ADAT2Q7Z6V5 191 aaKnown RBP17.68■□□□□ 0.42
NELFCD-201ENST00000460601 RXFP2Q8WXD0 754 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 LRRC4Q9HBW1 653 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 PCDHA3Q9Y5H8 950 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 CHD9Q3L8U1 2897 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 LRCH4O75427 683 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 USP17L7P0C7H9 530 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 CPB1P15086 417 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 PDGFRAP16234 1089 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 SLC1A1P43005 524 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 TAP1Q03518 808 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 IFRD2Q12894 506 aaPredicted RBP17.68■□□□□ 0.42
NELFCD-201ENST00000460601 TUBB2AQ13885 445 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 ERCC6LQ2NKX8 1250 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 SMTNL2Q2TAL5 461 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 COL13A1Q5TAT6 717 aaPredicted RBP17.68■□□□□ 0.42
NELFCD-201ENST00000460601 CC2D1AQ6P1N0 951 aaPredicted RBP17.68■□□□□ 0.42
NELFCD-201ENST00000460601 HFE2Q6ZVN8 426 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 CMTR2Q8IYT2 770 aaKnown RBP17.68■□□□□ 0.42
NELFCD-201ENST00000460601 COLGALT1Q8NBJ5 622 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 SCAMP5Q8TAC9 235 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 RNPC3Q96LT9 517 aaKnown RBP17.68■□□□□ 0.42
NELFCD-201ENST00000460601 ZNF558Q96NG5 402 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 TUBB2BQ9BVA1 445 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 ULBP1Q9BZM6 244 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 CRISPLD1Q9H336 500 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 CDY1Q9Y6F8 540 aa17.68■□□□□ 0.42
NELFCD-201ENST00000460601 LCHNA4D1U4 455 aa17.67■□□□□ 0.42
NELFCD-201ENST00000460601 MIF4GDA9UHW6 222 aaKnown RBP17.67■□□□□ 0.42
NELFCD-201ENST00000460601 MAPRE1Q15691 268 aaKnown RBP17.67■□□□□ 0.42
NELFCD-201ENST00000460601 KCNT1Q5JUK3 1230 aa17.67■□□□□ 0.42
NELFCD-201ENST00000460601 RNF168Q8IYW5 571 aaPredicted RBP17.67■□□□□ 0.42
NELFCD-201ENST00000460601 SIX6OS1Q8N1H7 587 aa17.67■□□□□ 0.42
NELFCD-201ENST00000460601 SLC39A11Q8N1S5 342 aa17.67■□□□□ 0.42
NELFCD-201ENST00000460601 UBL4BQ8N7F7 174 aa17.67■□□□□ 0.42
NELFCD-201ENST00000460601 CEP112Q8N8E3 955 aa17.67■□□□□ 0.42
NELFCD-201ENST00000460601 GPR152Q8TDT2 470 aa17.67■□□□□ 0.42
NELFCD-201ENST00000460601 AUTS2Q8WXX7 1259 aa17.67■□□□□ 0.42
NELFCD-201ENST00000460601 RIN2Q8WYP3 895 aaPredicted RBP17.67■□□□□ 0.42
NELFCD-201ENST00000460601 KCTD13Q8WZ19 329 aa17.67■□□□□ 0.42
NELFCD-201ENST00000460601 FAM149B1Q96BN6 582 aa17.67■□□□□ 0.42
NELFCD-201ENST00000460601 ZBED2Q9BTP6 218 aa17.67■□□□□ 0.42
NELFCD-201ENST00000460601 DMAP1Q9NPF5 467 aaPredicted RBP17.67■□□□□ 0.42
NELFCD-201ENST00000460601 KIAA1671Q9BY89 1806 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 CCDC66A2RUB6 948 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 CTAGE15A4D2H0 777 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 CTIFO43310 598 aaKnown RBP17.66■□□□□ 0.42
NELFCD-201ENST00000460601 TBC1D4O60343 1298 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 VNN2O95498 520 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 LINC00271P0C7V0 271 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 CTAGE8P0CG41 777 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 CTNNA2P26232 953 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 IL1R2P27930 398 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 GRIK1P39086 918 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 ACADSBP45954 432 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 MRPS25P82663 173 aaKnown RBP17.66■□□□□ 0.42
NELFCD-201ENST00000460601 ELAVL2Q12926 359 aaKnown RBP17.66■□□□□ 0.42
NELFCD-201ENST00000460601 PIGHQ14442 188 aaPredicted RBP17.66■□□□□ 0.42
NELFCD-201ENST00000460601 DDR2Q16832 855 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 CCDC14Q49A88 953 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 RAB41Q5JT25 222 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 RNF19BQ6ZMZ0 732 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 SLC26A9Q7LBE3 791 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 ANKS1BQ7Z6G8 1248 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 CTAGE6Q86UF2 777 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 CTAGE4Q8IX94 777 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 DPF3Q92784 378 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 AP1M1Q9BXS5 423 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 CALCOCO1Q9P1Z2 691 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 SLC27A5Q9Y2P5 690 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 CEP290O15078 2479 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 YJEFN3A6XGL0 299 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 E7ENQ6 273 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 CSPG5O95196 566 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 FGGP02679 453 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 GPD1P21695 349 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 DNAJB2P25686 324 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 MAN1A1P33908 653 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 GTF2F1P35269 517 aaKnown RBP eCLIP17.66■□□□□ 0.42
NELFCD-201ENST00000460601 ZNF143P52747 638 aaPredicted RBP17.66■□□□□ 0.42
NELFCD-201ENST00000460601 ATXN1P54253 815 aaKnown RBP17.66■□□□□ 0.42
NELFCD-201ENST00000460601 PITX1P78337 314 aaPredicted RBP17.66■□□□□ 0.42
NELFCD-201ENST00000460601 MRPS5P82675 430 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms