RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 MAMDC2Q7Z304 686 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 BRAPQ7Z569 592 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 TMC3Q7Z5M5 1100 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 C11orf74Q86VG3 221 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 PPM1KQ8N3J5 372 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 CAMKK1Q8N5S9 505 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 TOP6BLQ8N6T0 577 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 TMEM145Q8NBT3 493 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 PIWIL2Q8TC59 973 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 ENOX1Q8TC92 643 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 CSGALNACT1Q8TDX6 532 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 TRAPPC12Q8WVT3 735 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 ING5Q8WYH8 240 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 KCTD13Q8WZ19 329 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 PTPRN2Q92932 1015 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 BRF1Q92994 677 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 WBP1Q96G27 269 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 TMEM47Q9BQJ4 181 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 ORAI3Q9BRQ5 295 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 HERC2P3Q9BVR0 1158 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 PLA2G2FQ9BZM2 168 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 NOL6Q9H6R4 1146 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 AZI2Q9H6S1 392 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 ZFP14Q9HCL3 533 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 ZNF334Q9HCZ1 680 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 DNAJB4Q9UDY4 337 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 SLC8A2Q9UPR5 921 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 FAN1Q9Y2M0 1017 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 SF3B6Q9Y3B4 125 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 TELO2Q9Y4R8 837 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 NPFFR2Q9Y5X5 522 aa4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 UTP20O75691 2785 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-211ENST00000460558 MED13LQ71F56 2210 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 ARID2Q68CP9 1835 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 GSTTP1A0A1W2PQM5 241 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 TRABD2BA6NFA1 517 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 ZNF263O14978 683 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 RRP8O43159 456 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 GPAA1O43292 621 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 MARCH6O60337 910 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 OPHN1O60890 802 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 ATG13O75143 517 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 MAFO75444 373 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 LEFTY1O75610 366 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 PRAMEF1O95521 474 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 ASLP04424 464 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 ALDH2P05091 517 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 C8AP07357 584 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 IFIT2P09913 472 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 SNHG28P0DPA3 235 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 ENGP17813 658 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 KLRC1P26715 233 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 HOXA9P31269 272 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 IL12RB1P42701 662 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 CTSKP43235 329 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 KPNA1P52294 538 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 MRPS9P82933 396 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 DSG1Q02413 1049 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 MAPK6Q16659 721 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 QRICH1Q2TAL8 776 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 SFRP5Q5T4F7 317 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 ACBD5Q5T8D3 534 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 PMS2CLQ68D20 193 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 DENND5AQ6IQ26 1287 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 LILRA6Q6PI73 481 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 OGFOD3Q6PK18 319 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 PCSK4Q6UW60 755 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 ZNF574Q6ZN55 896 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 TOGARAM2Q6ZUX3 1019 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 DDX42Q86XP3 938 aaKnown RBP eCLIP4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 KIAA0319LQ8IZA0 1049 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 ADGRF4Q8IZF3 695 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 IFNL3Q8IZI9 196 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 CLASRPQ8N2M8 674 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 PNPLA1Q8N8W4 532 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 URGCPQ8TCY9 931 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 DEPDC1BQ8WUY9 529 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 PIGKQ92643 395 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 PPP1R14AQ96A00 147 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 MCRS1Q96EZ8 462 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 HEXIM2Q96MH2 286 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 FAM193BQ96PV7 902 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 PPP1R16BQ96T49 567 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 FAM83CQ9BQN1 747 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 TMEM175Q9BSA9 504 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 AMNQ9BXJ7 453 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 HDAC8Q9BY41 377 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 GPR62Q9BZJ7 368 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 UBA5Q9GZZ9 404 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 NAPBQ9H115 298 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 BOLA2Q9H3K6 86 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 C8orf33Q9H7E9 229 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 GFOD1Q9NXC2 390 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 RTEL1Q9NZ71 1219 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 FNIP2Q9P278 1114 aa4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.52□□□□□ -1.69
ECHDC1-211ENST00000460558 MTORP42345 2549 aa4.51□□□□□ -1.69
ECHDC1-211ENST00000460558 MED13Q9UHV7 2174 aa4.51□□□□□ -1.69
ECHDC1-211ENST00000460558 GCOM1H8Y6P7 765 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms