RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 F8VP50 259 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 AP5Z1O43299 807 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 CALB1P05937 261 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 MYBL1P10243 752 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 YWHAQP27348 245 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 CDC25CP30307 473 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 ARHGAP15Q53QZ3 475 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 TAF3Q5VWG9 929 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 ANKRD54Q6NXT1 300 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 LLGL2Q6P1M3 1020 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 CLEC20AQ6ZU45 233 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 NOP9Q86U38 636 aaKnown RBP11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 C1orf131Q8NDD1 294 aaKnown RBP11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 SLC35F5Q8WV83 523 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 IRGQQ8WZA9 623 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 PSMG2Q969U7 264 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 TRMT2BQ96GJ1 504 aaKnown RBP11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 PPP1R13BQ96KQ4 1090 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 BAG1Q99933 345 aaPredicted RBP11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 TMLHEQ9NVH6 421 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 CLDND1Q9NY35 253 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 LCMT1Q9UIC8 334 aa11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 NOCTQ9UK39 431 aaKnown RBP11.62□□□□□ -0.55
SMNDC1-203ENST00000460483 CLDN5O00501 218 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 HCRTO43612 131 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 EPCAMP16422 314 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 PFKLP17858 780 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 DDX6P26196 483 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 CDH5P33151 784 aaPredicted RBP11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 MTHFRP42898 656 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 GPD2P43304 727 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 KRT83P78385 493 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 PDE4CQ08493 712 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 ADGRE1Q14246 886 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 PTPN21Q16825 1174 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 DDR2Q16832 855 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 EFHC1Q5JVL4 640 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 PDZD4Q76G19 769 aaPredicted RBP11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 DNAJB7Q7Z6W7 309 aaPredicted RBP11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 ADGRD2Q7Z7M1 963 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 PIGZQ86VD9 579 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 MON1AQ86VX9 555 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 SCML4Q8N228 414 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 TC2NQ8N9U0 490 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 VN1R2Q8NFZ6 395 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 UBA3Q8TBC4 463 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 MYLIPQ8WY64 445 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 TFAP2BQ92481 460 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 SECISBP2LQ93073 1101 aaKnown RBP11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 HLA-CQ95604 372 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 C18orf8Q96DM3 657 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 CALR3Q96L12 384 aaKnown RBP11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 MYRFLQ96LU7 910 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 ADAM7Q9H2U9 754 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 MRPL47Q9HD33 250 aaKnown RBP11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 TLR8Q9NR97 1041 aaKnown RBP11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 TRPM5Q9NZQ8 1165 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 ADAMTS1Q9UHI8 967 aa11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 AJAP1Q9UKB5 411 aaPredicted RBP11.61□□□□□ -0.55
SMNDC1-203ENST00000460483 NCANO14594 1321 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 RANBP2P49792 3224 aaKnown RBP11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 ANK1P16157 1881 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 PDCD11Q14690 1871 aaKnown RBP11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 RTN2O75298 545 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 SEC24AO95486 1093 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 ZBED1O96006 694 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 CYP1A1P04798 512 aaPredicted RBP11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 GLI1P08151 1106 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 MMEP08473 750 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 SPATA31D3P0C874 917 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 PNMA6AP0CW24 399 aaPredicted RBP11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 RALAP11233 206 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 SCNN1AP37088 669 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 TKTL1P51854 596 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 SLC5A3P53794 718 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 CENPCQ03188 943 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 PDCLQ13371 301 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 KCNC3Q14003 757 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 SLC18A3Q16572 532 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 CLEC16AQ2KHT3 1053 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 CTC1Q2NKJ3 1217 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 PKDCCQ504Y2 493 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 ACAD10Q6JQN1 1059 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 SPATA31D4Q6ZUB0 917 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 PAQR9Q6ZVX9 377 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 CCDC186Q7Z3E2 898 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 GPR149Q86SP6 731 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 TMEM110Q86TL2 294 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 TTC30AQ86WT1 665 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 DDX1Q92499 740 aaKnown RBP11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 SMG7Q92540 1137 aaKnown RBP11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 MRPS31Q92665 395 aaKnown RBP11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 KCNK16Q96T55 309 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 NHEJ1Q9H9Q4 299 aaPredicted RBP11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 AVENQ9NQS1 362 aaPredicted RBP11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 ADAM22Q9P0K1 906 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 MAGED2Q9UNF1 606 aaPredicted RBP11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 NME7Q9Y5B8 376 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 PCDHGC5Q9Y5F6 944 aa11.6□□□□□ -0.55
SMNDC1-203ENST00000460483 ZFP37Q9Y6Q3 630 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms