RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 ZNF484Q5JVG2 852 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 TREML2Q5T2D2 321 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 RAPH1Q70E73 1250 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 TRIM50Q86XT4 487 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 TNIP2Q8NFZ5 429 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 SLC35G2Q8TBE7 412 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 ZNF398Q8TD17 642 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 APBB2Q92870 758 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 L3MBTL3Q96JM7 780 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-202ENST00000460333 RBM15Q96T37 977 aaKnown RBP eCLIP6.45□□□□□ -1.382e-6■■■□□ 17.4
VPS13D-202ENST00000460333 CYP4F11Q9HBI6 524 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 VTA1Q9NP79 307 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 ADAMTS5Q9UNA0 930 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 ZBTB39O15060 712 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 GSTA4O15217 222 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 NKRFO15226 690 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS13D-202ENST00000460333 FTLP02792 175 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-202ENST00000460333 SRGAP2BP0DMP2 458 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 KCNA2P16389 499 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 GALCP54803 685 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 NCKAP1LP55160 1127 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 IGBP1P78318 339 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 TFDP2Q14188 446 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 PRPSAP1Q14558 356 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 TAF1BQ53T94 588 aaPredicted RBP6.45□□□□□ -1.38
VPS13D-202ENST00000460333 KIAA1841Q6NSI8 718 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 RFX8Q6ZV50 586 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 LRRC15Q8TF66 581 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 TMEM143Q96AN5 459 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 DACH2Q96NX9 599 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 ZWILCHQ9H900 591 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 GIMAP4Q9NUV9 329 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 HACD3Q9P035 362 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 FAM153AQ9UHL3 310 aa6.45□□□□□ -1.38
VPS13D-202ENST00000460333 IPO11Q9UI26 975 aaKnown RBP6.45□□□□□ -1.38
VPS13D-202ENST00000460333 TM9SF1O15321 606 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 DHX15O43143 795 aaKnown RBP6.44□□□□□ -1.38
VPS13D-202ENST00000460333 PSMG1O95456 288 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 OCM2P0CE71 109 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 OCMP0CE72 109 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-202ENST00000460333 TAC1P20366 129 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 TTKP33981 857 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 PPARGP37231 505 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-202ENST00000460333 MAGEA4P43358 317 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 AMPD2Q01433 879 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 GPS1Q13098 491 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 PDAP1Q13442 181 aaKnown RBP6.44□□□□□ -1.38
VPS13D-202ENST00000460333 MORF4L2Q15014 288 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 EFHC1Q5JVL4 640 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 ABHD15Q6UXT9 468 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 DPH6Q7L8W6 267 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 PRPF39Q86UA1 669 aaKnown RBP6.44□□□□□ -1.38
VPS13D-202ENST00000460333 LRRC6Q86X45 466 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 ERICH1Q86X53 443 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 ARRDC4Q8NCT1 418 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 SH3TC2Q8TF17 1288 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 ZFAND2BQ8WV99 257 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 KAT2BQ92831 832 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 FAF2Q96CS3 445 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 HDAC11Q96DB2 347 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 CNBD2Q96M20 576 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 AGPAT1Q99943 283 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 SH2D3AQ9BRG2 576 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 UBXN6Q9BZV1 441 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 SNX25Q9H3E2 840 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 RPF1Q9H9Y2 349 aaKnown RBP6.44□□□□□ -1.38
VPS13D-202ENST00000460333 GPRC5CQ9NQ84 441 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 RBAKQ9NYW8 714 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-202ENST00000460333 RABGEF1Q9UJ41 708 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 WDR37Q9Y2I8 494 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 PCDHB4Q9Y5E5 795 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 ADAMTSL1Q8N6G6 1762 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 PDHXO00330 501 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 EDIL3O43854 480 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 HOXC6P09630 235 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 CYP2B6P20813 491 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 EIF2B2P49770 351 aaKnown RBP6.44□□□□□ -1.38
VPS13D-202ENST00000460333 DNAJC3Q13217 504 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 EPS8L3Q8TE67 593 aaKnown RBP6.44□□□□□ -1.38
VPS13D-202ENST00000460333 ATP8B4Q8TF62 1192 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 MRPS26Q9BYN8 205 aaKnown RBP6.44□□□□□ -1.38
VPS13D-202ENST00000460333 KLHL25Q9H0H3 589 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 KRT82Q9NSB4 513 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 ADA2Q9NZK5 511 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 ARHGAP20Q9P2F6 1191 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 HEY2Q9UBP5 337 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 IP6K2Q9UHH9 426 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 STARD13Q9Y3M8 1113 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 TGFB1I1O43294 461 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 MED7O43513 233 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 CCNE2O96020 404 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 PRKCBP05771 671 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 KITP10721 976 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 IMPDH2P12268 514 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 UBA1P22314 1058 aaKnown RBP6.44□□□□□ -1.38
VPS13D-202ENST00000460333 YARSP54577 528 aaKnown RBP6.44□□□□□ -1.38
VPS13D-202ENST00000460333 MTTPP55157 894 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 PTENP60484 403 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 TAP1Q03518 808 aa6.44□□□□□ -1.38
VPS13D-202ENST00000460333 ENPEPQ07075 957 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms