RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 YY1P25490 414 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 MST1P26927 711 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 NTSR1P30989 418 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 POLE2P56282 527 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 SP2Q02086 613 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 GUCY1B3Q02153 619 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 GPS1Q13098 491 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 LY6KQ17RY6 165 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 TIGD2Q4W5G0 525 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 SULT6B1Q6IMI4 303 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 JMJD6Q6NYC1 403 aaPredicted RBP6.39□□□□□ -1.39
CCDC50-203ENST00000460064 KLHL17Q6TDP4 642 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 CCDC117Q8IWD4 279 aaPredicted RBP6.39□□□□□ -1.39
CCDC50-203ENST00000460064 ABRAQ8N0Z2 381 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 ABHD5Q8WTS1 349 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 OSCP1Q8WVF1 389 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 RUBCNQ92622 972 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 DVL3Q92997 716 aaPredicted RBP6.39□□□□□ -1.39
CCDC50-203ENST00000460064 EID2BQ96D98 161 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 C17orf80Q9BSJ5 609 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 FAM167BQ9BTA0 163 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 KATNAL1Q9BW62 490 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 ZCWPW1Q9H0M4 648 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 ITM2CQ9NQX7 267 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 HELLSQ9NRZ9 838 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 HERC5Q9UII4 1024 aaKnown RBP6.39□□□□□ -1.39
CCDC50-203ENST00000460064 CA14Q9ULX7 337 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 USP22Q9UPT9 525 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 GPR52Q9Y2T5 361 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 TMEM200CA6NKL6 621 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 BTBD11A6QL63 1104 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 FCHO1O14526 889 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 SPDEFO95238 335 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 NTSR2O95665 410 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 GLP2RO95838 553 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 VIPP01282 170 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 LMNAP02545 664 aaKnown RBP6.38□□□□□ -1.39
CCDC50-203ENST00000460064 ITGA2BP08514 1039 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 VEGFAP15692 232 aaPredicted RBP6.38□□□□□ -1.39
CCDC50-203ENST00000460064 ZFP36P26651 326 aaKnown RBP6.38□□□□□ -1.39
CCDC50-203ENST00000460064 EPHA3P29320 983 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 HNRNPMP52272 730 aaKnown RBP eCLIP6.38□□□□□ -1.39
CCDC50-203ENST00000460064 TP53BP2Q13625 1128 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 SF3B3Q15393 1217 aaKnown RBP6.38□□□□□ -1.39
CCDC50-203ENST00000460064 TAF5Q15542 800 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 SPDYAQ5MJ70 313 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 GPR149Q86SP6 731 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 IZUMO1Q8IYV9 350 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 ATG4AQ8WYN0 398 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 GOLGA2P5Q9HBQ8 144 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 TBCCD1Q9NVR7 557 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 DKK2Q9UBU2 259 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 TESQ9UGI8 421 aaKnown RBP6.38□□□□□ -1.39
CCDC50-203ENST00000460064 GTF2A1LQ9UNN4 478 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 FZD1Q9UP38 647 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 SNX14Q9Y5W7 946 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 HS3ST4Q9Y661 456 aa6.38□□□□□ -1.39
CCDC50-203ENST00000460064 ADM5C9JUS6 153 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 IPO5O00410 1097 aaKnown RBP6.37□□□□□ -1.39
CCDC50-203ENST00000460064 DNPH1O43598 174 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 LPXNO60711 386 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 PDHA1P08559 390 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 ARP10275 920 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 GYS1P13807 737 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 SLC5A2P31639 672 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 ALDH18A1P54886 795 aaKnown RBP6.37□□□□□ -1.39
CCDC50-203ENST00000460064 ARL4CP56559 192 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 ATP1A4Q13733 1029 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 TRIM71Q2Q1W2 868 aaKnown RBP6.37□□□□□ -1.39
CCDC50-203ENST00000460064 SLC9A4Q6AI14 798 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 ABLIM2Q6H8Q1 611 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 CLEC9AQ6UXN8 241 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 DTX2Q86UW9 622 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 ANKRD18AQ8IVF6 992 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 SYNE4Q8N205 404 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 C11orf44Q8N8P7 122 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 TOR1AIP2Q8NFQ8 470 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 STT3BQ8TCJ2 826 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 ZDHHC12Q96GR4 267 aa6.37□□□□□ -1.39
CCDC50-203ENST00000460064 INO80BQ9C086 356 aaPredicted RBP6.37□□□□□ -1.39
CCDC50-203ENST00000460064 PNMA6EA0A0J9YXQ4 647 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 ZAR1LA6NP61 321 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 M0R3H8 397 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 AGPSO00116 658 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 FOXD2O60548 495 aaPredicted RBP6.36□□□□□ -1.39
CCDC50-203ENST00000460064 ERBB2P04626 1255 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 SRGNP10124 158 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 MAGEA10P43363 369 aaPredicted RBP6.36□□□□□ -1.39
CCDC50-203ENST00000460064 MAPK9P45984 424 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 MTHFSP49914 203 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 ITIH3Q06033 890 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 EIF2B5Q13144 721 aaKnown RBP6.36□□□□□ -1.39
CCDC50-203ENST00000460064 ATPAF1Q5TC12 328 aaPredicted RBP6.36□□□□□ -1.39
CCDC50-203ENST00000460064 TANGO2Q6ICL3 276 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 RFX8Q6ZV50 586 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 TTC30AQ86WT1 665 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 FSTL5Q8N475 847 aaPredicted RBP6.36□□□□□ -1.39
CCDC50-203ENST00000460064 PAF1Q8N7H5 531 aa6.36□□□□□ -1.39
CCDC50-203ENST00000460064 OTUD7AQ8TE49 926 aaPredicted RBP6.36□□□□□ -1.39
CCDC50-203ENST00000460064 SSH3Q8TE77 659 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms