RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 F11P03951 625 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 SETSIPP0DME0 302 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 FCARP24071 287 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 CLCN1P35523 988 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 UBASH3AP57075 661 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 NR1I3Q14994 352 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 OTOP3Q7RTS5 596 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 PIGZQ86VD9 579 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 PASD1Q8IV76 773 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 NUP93Q8N1F7 819 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 ANKRD52Q8NB46 1076 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 UBA3Q8TBC4 463 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 EPS8L1Q8TE68 723 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 FBXO32Q969P5 355 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 SPAG5Q96R06 1193 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 STK33Q9BYT3 514 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 ATXN3LQ9H3M9 355 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 SLITRK6Q9H5Y7 841 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 GMIPQ9P107 970 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 UXTQ9UBK9 157 aaPredicted RBP13.55□□□□□ -0.24
COL18A1-206ENST00000459895 DAAM1Q9Y4D1 1078 aa13.55□□□□□ -0.24
COL18A1-206ENST00000459895 ZNF197O14709 1029 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 AP5Z1O43299 807 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 RTN3O95197 1032 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-206ENST00000459895 PRAMEF12O95522 483 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 FGF19O95750 216 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 ASGR2P07307 311 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 SOX5P35711 763 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 PLA2G4AP47712 749 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 PDE6CP51160 858 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 ADIGQ0VDE8 80 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 TAF10Q12962 218 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 HTR4Q13639 388 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 STILQ15468 1287 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 GPR158Q5T848 1215 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 E4F1Q66K89 784 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-206ENST00000459895 NOP9Q86U38 636 aaKnown RBP13.54□□□□□ -0.24
COL18A1-206ENST00000459895 ZDHHC14Q8IZN3 488 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 SLC20A1Q8WUM9 679 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 BAP1Q92560 729 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 ACSF2Q96CM8 615 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-206ENST00000459895 MCRS1Q96EZ8 462 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 ZSWIM3Q96MP5 696 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.54□□□□□ -0.24
COL18A1-206ENST00000459895 CYTH4Q9UIA0 394 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 NOCTQ9UK39 431 aaKnown RBP13.54□□□□□ -0.24
COL18A1-206ENST00000459895 KIAA1257Q9ULG3 409 aa13.54□□□□□ -0.24
COL18A1-206ENST00000459895 FAM170AA1A519 330 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 FAM92AA1XBS5 289 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 C2orf78A6NCI8 922 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 LRRC53A6NM62 1247 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 MED7O43513 233 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 LAMP2P13473 410 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 CYP11B1P15538 503 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 PGFP49763 221 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 RGS7P49802 495 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 CNGA2Q16280 664 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 MEA1Q16626 185 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 ARHGAP15Q53QZ3 475 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 RAB41Q5JT25 222 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 TAF3Q5VWG9 929 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 BHLHA9Q7RTU4 235 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 CACNA2D4Q7Z3S7 1137 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 C1orf131Q8NDD1 294 aaKnown RBP13.53□□□□□ -0.24
COL18A1-206ENST00000459895 ZSCAN18Q8TBC5 510 aaPredicted RBP13.53□□□□□ -0.24
COL18A1-206ENST00000459895 ZNF606Q8WXB4 792 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 FGF14Q92915 247 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 SLITRK1Q96PX8 696 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 KXD1Q9BQD3 176 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 SMG9Q9H0W8 520 aaKnown RBP13.53□□□□□ -0.24
COL18A1-206ENST00000459895 TRPC7Q9HCX4 862 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 IL37Q9NZH6 218 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 NUMBLQ9Y6R0 609 aa13.53□□□□□ -0.24
COL18A1-206ENST00000459895 PIK3R2O00459 728 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 GABBR2O75899 941 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 GYPCP04921 128 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 YWHAQP27348 245 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 TKTL1P51854 596 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 KIF11P52732 1056 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 SLC8A3P57103 927 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 PTK2Q05397 1052 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 PDCLQ13371 301 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 FAM78AQ5JUQ0 283 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 TXNDC8Q6A555 127 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 SMYD5Q6GMV2 418 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 PMF1Q6P1K2 205 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 PARM1Q6UWI2 310 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 CCDC186Q7Z3E2 898 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 GJD3Q8N144 294 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 MAB21L3Q8N8X9 362 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 PDZD8Q8NEN9 1154 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 RSAD2Q8WXG1 361 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 DDX1Q92499 740 aaKnown RBP13.52□□□□□ -0.25
COL18A1-206ENST00000459895 MRPS31Q92665 395 aaKnown RBP13.52□□□□□ -0.25
COL18A1-206ENST00000459895 RSPRY1Q96DX4 576 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 ASB16Q96NS5 453 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 SLC22A12Q96S37 553 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 ULBP1Q9BZM6 244 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 SMOC2Q9H3U7 446 aa13.52□□□□□ -0.25
COL18A1-206ENST00000459895 GDE1Q9NZC3 331 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms