RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 NME7Q9Y5B8 376 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 R4GN57 208 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 EML5Q05BV3 1969 aa10.64□□□□□ -0.71
HDLBP-228ENST00000459788 CETN3O15182 167 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 HCRTO43612 131 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 FOXD2O60548 495 aaPredicted RBP10.63□□□□□ -0.71
HDLBP-228ENST00000459788 LRP3O75074 770 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 NFATC1O95644 943 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 OAS1P00973 400 aaKnown RBP10.63□□□□□ -0.71
HDLBP-228ENST00000459788 HLA-DRAP01903 254 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 YWHAQP27348 245 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 IFNAR2P48551 515 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 C1orf220Q5T0J3 134 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 ZNF658Q5TYW1 1059 aaPredicted RBP10.63□□□□□ -0.71
HDLBP-228ENST00000459788 SDHAF4Q5VUM1 108 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 KRT39Q6A163 491 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 TXNDC11Q6PKC3 985 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 FAM186BQ8IYM0 893 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 ZNF276Q8N554 614 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 ENGASEQ8NFI3 743 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 OTUB2Q96DC9 234 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 ZFYVE19Q96K21 471 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 GOLPH3LQ9H4A5 285 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 FBXO44Q9H4M3 255 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 ECT2Q9H8V3 914 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 TMEM8AQ9HCN3 771 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 CSNK1G1Q9HCP0 422 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 TRPC7Q9HCX4 862 aa10.63□□□□□ -0.71
HDLBP-228ENST00000459788 DUS2Q9NX74 493 aaKnown RBP10.63□□□□□ -0.71
HDLBP-228ENST00000459788 DMXL1Q9Y485 3027 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 TNFRSF10BO14763 440 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 SLC16A3O15427 465 aaKnown RBP10.62□□□□□ -0.71
HDLBP-228ENST00000459788 AKAP3O75969 853 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 ZDHHC11BP0C7U3 371 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 PRR29P0C7W0 189 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 SDHBP21912 280 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 GJA4P35212 333 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 EIF2DP41214 584 aaKnown RBP10.62□□□□□ -0.71
HDLBP-228ENST00000459788 PIK3CAP42336 1068 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 ASPAP45381 313 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 USP46P62068 366 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 DLG4P78352 724 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 LRRC63Q05C16 580 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 TNK2Q07912 1038 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 TAF10Q12962 218 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 PON2Q15165 354 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 CCDC142Q17RM4 750 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 EML3Q32P44 896 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 FAM35AQ86V20 835 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 LONP2Q86WA8 852 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 ZC3H3Q8IXZ2 948 aaKnown RBP10.62□□□□□ -0.71
HDLBP-228ENST00000459788 CAMKK1Q8N5S9 505 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 ARL14EPQ8N8R7 260 aaPredicted RBP10.62□□□□□ -0.71
HDLBP-228ENST00000459788 SH3RF2Q8TEC5 729 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 HNRNPABQ99729 332 aaKnown RBP10.62□□□□□ -0.71
HDLBP-228ENST00000459788 TSG101Q99816 390 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 P2RY13Q9BPV8 354 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 NT5C1AQ9BXI3 368 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 ZNF518BQ9C0D4 1074 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 NIF3L1Q9GZT8 377 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 SMG9Q9H0W8 520 aaKnown RBP10.62□□□□□ -0.71
HDLBP-228ENST00000459788 DPEP3Q9H4B8 488 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 EBF3Q9H4W6 596 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 SMYD3Q9H7B4 428 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 TBC1D14Q9P2M4 693 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 PLXND1Q9Y4D7 1925 aa10.62□□□□□ -0.71
HDLBP-228ENST00000459788 E2F8A0AVK6 867 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 C2orf78A6NCI8 922 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 K7ESF4 209 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 LEFTY2O00292 366 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 EPB41P11171 864 aaKnown RBP10.61□□□□□ -0.71
HDLBP-228ENST00000459788 SOX9P48436 509 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 PSEN1P49768 467 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 NDST1P52848 882 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 CDH8P55286 799 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 FKBP3Q00688 224 aaKnown RBP10.61□□□□□ -0.71
HDLBP-228ENST00000459788 GAS6Q14393 721 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 HSF5Q4G112 596 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-228ENST00000459788 PREPLQ4J6C6 727 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-228ENST00000459788 LAIR1Q6GTX8 287 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 KLHDC10Q6PID8 442 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 PAQR9Q6ZVX9 377 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 ERMP1Q7Z2K6 904 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 WDR5BQ86VZ2 330 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 FUKQ8N0W3 1084 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 FBXL13Q8NEE6 735 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 ACDQ96AP0 544 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 SLC22A12Q96S37 553 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 CYP2S1Q96SQ9 504 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 MED10Q9BTT4 135 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 UBXN6Q9BZV1 441 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 RAB23Q9ULC3 237 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 CIZ1Q9ULV3 898 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-228ENST00000459788 SMG5Q9UPR3 1016 aaKnown RBP10.61□□□□□ -0.71
HDLBP-228ENST00000459788 COQ4Q9Y3A0 265 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 PCDHA5Q9Y5H7 936 aa10.61□□□□□ -0.71
HDLBP-228ENST00000459788 PMM2O15305 246 aa10.6□□□□□ -0.71
HDLBP-228ENST00000459788 CILPO75339 1184 aa10.6□□□□□ -0.71
HDLBP-228ENST00000459788 AP1G2O75843 785 aa10.6□□□□□ -0.71
HDLBP-228ENST00000459788 FAM200BP0CF97 657 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms