RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 A0A088AWK7 358 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 EXTL3O43909 919 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 C4BPAP04003 597 aaKnown RBP14.29□□□□□ -0.12
PTPRE-204ENST00000455661 VCLP18206 1134 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 PSMD6Q15008 389 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 UGCGQ16739 394 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 TKFCQ3LXA3 575 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 HSF5Q4G112 596 aaPredicted RBP14.29□□□□□ -0.12
PTPRE-204ENST00000455661 SFT2D3Q587I9 215 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 TDRD10Q5VZ19 366 aaKnown RBP14.29□□□□□ -0.12
PTPRE-204ENST00000455661 POLNQ7Z5Q5 900 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 LDHDQ86WU2 507 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 CTAGE3PQ8IX95 158 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 SLC26A7Q8TE54 656 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 PYDC1Q8WXC3 89 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 JADE3Q92613 823 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 APBB2Q92870 758 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 NTPCRQ9BSD7 190 aaKnown RBP14.29□□□□□ -0.12
PTPRE-204ENST00000455661 MECRQ9BV79 373 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 A6NJR5 290 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 ATP9BO43861 1147 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 ASLP04424 464 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 RGS2P41220 211 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 CLDN10P78369 228 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 MTMR1Q13613 665 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 FAM98CQ17RN3 349 aaKnown RBP14.29□□□□□ -0.12
PTPRE-204ENST00000455661 BBS12Q6ZW61 710 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 IGDCC3Q8IVU1 814 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 GDPD5Q8WTR4 605 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 ZNF606Q8WXB4 792 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 DGCR14Q96DF8 476 aaKnown RBP14.29□□□□□ -0.12
PTPRE-204ENST00000455661 MPP4Q96JB8 637 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 MRIQ9BWK5 157 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 EPB41L1Q9H4G0 881 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 MARCOQ9UEW3 520 aaPredicted RBP14.29□□□□□ -0.12
PTPRE-204ENST00000455661 SSX2IPQ9Y2D8 614 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 PCDHAC2Q9Y5I4 1007 aa14.29□□□□□ -0.12
PTPRE-204ENST00000455661 CCDC195A0A1B0GUA6 201 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 KRT7P08729 469 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 AOC1P19801 751 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 CHN2P52757 468 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 OGDHQ02218 1023 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 WASHC5Q12768 1159 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 SPP2Q13103 211 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 DPYSL3Q14195 570 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 PDK3Q15120 406 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 HADHQ16836 314 aaKnown RBP14.28□□□□□ -0.12
PTPRE-204ENST00000455661 LPCAT4Q643R3 524 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 FAM196AQ6ZSG2 479 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 CDHR3Q6ZTQ4 885 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 SATL1Q86VE3 508 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 THNSL1Q8IYQ7 743 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 SAMD3Q8N6K7 520 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 PPM1NQ8N819 430 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 NIPA2Q8N8Q9 360 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 MIPOL1Q8TD10 442 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 SMYD3Q9H7B4 428 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 GALNT8Q9NY28 637 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 SIRPGQ9P1W8 387 aa14.28□□□□□ -0.12
PTPRE-204ENST00000455661 TXNDC9O14530 226 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 CSDE1O75534 798 aaKnown RBP14.27□□□□□ -0.12
PTPRE-204ENST00000455661 TMCC1O94876 653 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 KLHL2O95198 593 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 JAK3P52333 1124 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 AQP4P55087 323 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 PDE1BQ01064 536 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 UBAP2LQ14157 1087 aaKnown RBP14.27□□□□□ -0.12
PTPRE-204ENST00000455661 ANGEL2Q5VTE6 544 aaKnown RBP14.27□□□□□ -0.12
PTPRE-204ENST00000455661 DPY19L2Q6NUT2 758 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 UNC45BQ8IWX7 931 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 FAM71DQ8N9W8 422 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 TMEM35BQ8NCS4 154 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 ICA1LQ8NDH6 482 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 BSNDQ8WZ55 320 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 LENG1Q96BZ8 264 aaPredicted RBP14.27□□□□□ -0.12
PTPRE-204ENST00000455661 NMD3Q96D46 503 aaKnown RBP14.27□□□□□ -0.12
PTPRE-204ENST00000455661 SIKE1Q9BRV8 207 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 SLC13A1Q9BZW2 595 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 APOBEC3GQ9HC16 384 aaKnown RBP14.27□□□□□ -0.12
PTPRE-204ENST00000455661 PREBQ9HCU5 417 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 PNPLA8Q9NP80 782 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 ETNK2Q9NVF9 386 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 CNTN6Q9UQ52 1028 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 HBS1LQ9Y450 684 aaKnown RBP14.27□□□□□ -0.12
PTPRE-204ENST00000455661 TEX264Q9Y6I9 313 aa14.27□□□□□ -0.12
PTPRE-204ENST00000455661 MYH9P35579 1960 aaKnown RBP14.27□□□□□ -0.12
PTPRE-204ENST00000455661 C3orf70A6NLC5 250 aaPredicted RBP14.27□□□□□ -0.13
PTPRE-204ENST00000455661 MEI4A8MW99 385 aa14.27□□□□□ -0.13
PTPRE-204ENST00000455661 MCF2LO15068 1137 aa14.27□□□□□ -0.13
PTPRE-204ENST00000455661 ZNF862O60290 1169 aa14.27□□□□□ -0.13
PTPRE-204ENST00000455661 CCNT2O60583 730 aaKnown RBP14.27□□□□□ -0.13
PTPRE-204ENST00000455661 FAM155BO75949 473 aa14.27□□□□□ -0.13
PTPRE-204ENST00000455661 VNN1O95497 513 aa14.27□□□□□ -0.13
PTPRE-204ENST00000455661 LSM8O95777 96 aaKnown RBP14.27□□□□□ -0.13
PTPRE-204ENST00000455661 C6orf222P0C671 652 aaPredicted RBP14.27□□□□□ -0.13
PTPRE-204ENST00000455661 FAM200BP0CF97 657 aa14.27□□□□□ -0.13
PTPRE-204ENST00000455661 CPOXP36551 454 aa14.27□□□□□ -0.13
PTPRE-204ENST00000455661 CCNFP41002 786 aa14.27□□□□□ -0.13
PTPRE-204ENST00000455661 GRIA2P42262 883 aa14.27□□□□□ -0.13
PTPRE-204ENST00000455661 LIG4P49917 911 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms