RNA–Protein interactions for RNA: ENST00000455580.5

PPP1CB-208, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 3

Gene PPP1CB, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-208ENST00000455580 RTN3O95197 1032 aaPredicted RBP25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 YWHAQP27348 245 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 GTF2H1P32780 548 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 NRLP54845 237 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 SLC7A9P82251 487 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 ZXDBP98169 803 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 SATB1Q01826 763 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 TMEM196Q5HYL7 178 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 Q6ZS52 159 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 SMARCD1Q96GM5 515 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 IMPG2Q9BZV3 1241 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 ECT2Q9H8V3 914 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 TMEM8AQ9HCN3 771 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 IL37Q9NZH6 218 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 HMGXB4Q9UGU5 601 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 FAM186AA6NE01 2351 aa25.49■■□□□ 1.67
PPP1CB-208ENST00000455580 CFAP54Q96N23 3096 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 CETN3O15182 167 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 SMC2O95347 1197 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 OLFM2O95897 454 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 IFNAR2P48551 515 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 ORC1Q13415 861 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 EML3Q32P44 896 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 TTC16Q8NEE8 873 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 OVCA2Q8WZ82 227 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 EEF2KMTQ96G04 330 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 LINC00597Q9H2U6 94 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 CYP3A43Q9HB55 503 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 DMAP1Q9NPF5 467 aaPredicted RBP25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.48■■□□□ 1.672e-7■■■■□ 22
PPP1CB-208ENST00000455580 COMMD8Q9NX08 183 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 WNT6Q9Y6F9 365 aa25.48■■□□□ 1.67
PPP1CB-208ENST00000455580 AP1G2O75843 785 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 PAPSS2O95340 614 aaPredicted RBP25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 ABL1P00519 1130 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 OAS1P00973 400 aaKnown RBP25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 GJA4P35212 333 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 INCA1Q0VD86 236 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 GRSF1Q12849 480 aaKnown RBP eCLIP25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 IFRD2Q12894 506 aaPredicted RBP25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 KRT39Q6A163 491 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 FSTL4Q6MZW2 842 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 CPA6Q8N4T0 437 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 PDZD8Q8NEN9 1154 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 ZMIZ2Q8NF64 920 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 SCAMP5Q8TAC9 235 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 SLC2A14Q8TDB8 520 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 ERCC4Q92889 916 aaPredicted RBP25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 ATP2A3Q93084 1043 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 SMARCE1Q969G3 411 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 SMOQ99835 787 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 MMRN2Q9H8L6 949 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 CSNK1G1Q9HCP0 422 aa25.47■■□□□ 1.67
PPP1CB-208ENST00000455580 LEFTY2O00292 366 aa25.46■■□□□ 1.67
PPP1CB-208ENST00000455580 CCDC130P13994 396 aa25.46■■□□□ 1.67
PPP1CB-208ENST00000455580 GALK1P51570 392 aa25.46■■□□□ 1.67
PPP1CB-208ENST00000455580 ELOA2Q8IYF1 753 aaPredicted RBP25.46■■□□□ 1.67
PPP1CB-208ENST00000455580 KIAA1958Q8N8K9 716 aa25.46■■□□□ 1.67
PPP1CB-208ENST00000455580 C12orf29Q8N999 325 aa25.46■■□□□ 1.67
PPP1CB-208ENST00000455580 FBXO32Q969P5 355 aa25.46■■□□□ 1.67
PPP1CB-208ENST00000455580 TWNKQ96RR1 684 aa25.46■■□□□ 1.67
PPP1CB-208ENST00000455580 GTPBP4Q9BZE4 634 aaKnown RBP25.46■■□□□ 1.67
PPP1CB-208ENST00000455580 FBRSL1Q9HCM7 1045 aaKnown RBP25.46■■□□□ 1.67
PPP1CB-208ENST00000455580 CHORDC1Q9UHD1 332 aaPredicted RBP25.46■■□□□ 1.67
PPP1CB-208ENST00000455580 HOOK1Q9UJC3 728 aaKnown RBP25.46■■□□□ 1.67
PPP1CB-208ENST00000455580 FAM92AA1XBS5 289 aa25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 BEST1O76090 585 aa25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 EPB41P11171 864 aaKnown RBP25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 SLC5A3P53794 718 aa25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 SNX30Q5VWJ9 437 aa25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 ANKRD40Q6AI12 368 aa25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 CCDC150Q8NCX0 1101 aa25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 RUBCNQ92622 972 aa25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 TSG101Q99816 390 aa25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 NIF3L1Q9GZT8 377 aa25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 EPC1Q9H2F5 836 aa25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 KRT82Q9NSB4 513 aa25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 C2orf42Q9NWW7 574 aa25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 CPQQ9Y646 472 aa25.45■■□□□ 1.66
PPP1CB-208ENST00000455580 K7ESF4 209 aa25.44■■□□□ 1.66
PPP1CB-208ENST00000455580 STX10O60499 249 aa25.44■■□□□ 1.66
PPP1CB-208ENST00000455580 FKBP3Q00688 224 aaKnown RBP25.44■■□□□ 1.66
PPP1CB-208ENST00000455580 NR1H3Q13133 447 aa25.44■■□□□ 1.66
PPP1CB-208ENST00000455580 ZC3H3Q8IXZ2 948 aaKnown RBP25.44■■□□□ 1.66
PPP1CB-208ENST00000455580 WHAMMQ8TF30 809 aa25.44■■□□□ 1.66
PPP1CB-208ENST00000455580 SEMA4DQ92854 862 aa25.44■■□□□ 1.66
PPP1CB-208ENST00000455580 HNRNPABQ99729 332 aaKnown RBP25.44■■□□□ 1.66
PPP1CB-208ENST00000455580 P2RY13Q9BPV8 354 aa25.44■■□□□ 1.66
PPP1CB-208ENST00000455580 NT5C1AQ9BXI3 368 aa25.44■■□□□ 1.66
PPP1CB-208ENST00000455580 FAM49BQ9NUQ9 324 aa25.44■■□□□ 1.66
PPP1CB-208ENST00000455580 CILPO75339 1184 aa25.43■■□□□ 1.66
PPP1CB-208ENST00000455580 ZDHHC11BP0C7U3 371 aa25.43■■□□□ 1.66
PPP1CB-208ENST00000455580 TRIM21P19474 475 aaKnown RBP25.43■■□□□ 1.66
PPP1CB-208ENST00000455580 DRD1P21728 446 aa25.43■■□□□ 1.66
PPP1CB-208ENST00000455580 PMS1P54277 932 aaKnown RBP25.43■■□□□ 1.66
PPP1CB-208ENST00000455580 MAP3K7CLP57077 242 aa25.43■■□□□ 1.66
PPP1CB-208ENST00000455580 FBXL13Q8NEE6 735 aa25.43■■□□□ 1.66
PPP1CB-208ENST00000455580 EXOC4Q96A65 974 aa25.43■■□□□ 1.66
PPP1CB-208ENST00000455580 CYFIP2Q96F07 1278 aa25.43■■□□□ 1.66
PPP1CB-208ENST00000455580 FAXDC2Q96IV6 333 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms