RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 TNFRSF10BO14763 440 aa19.92■□□□□ 0.78
MSH6-206ENST00000455383 TACC1O75410 805 aa19.92■□□□□ 0.78
MSH6-206ENST00000455383 ALDH1A2O94788 518 aa19.92■□□□□ 0.78
MSH6-206ENST00000455383 KAT7O95251 611 aa19.92■□□□□ 0.78
MSH6-206ENST00000455383 HOXD13P35453 343 aa19.92■□□□□ 0.78
MSH6-206ENST00000455383 DHPSP49366 369 aaPredicted RBP19.92■□□□□ 0.78
MSH6-206ENST00000455383 FOXC1Q12948 553 aa19.92■□□□□ 0.78
MSH6-206ENST00000455383 CUL4AQ13619 759 aa19.92■□□□□ 0.78
MSH6-206ENST00000455383 C12orf40Q86WS4 652 aa19.92■□□□□ 0.78
MSH6-206ENST00000455383 WDR49Q8IV35 697 aa19.92■□□□□ 0.78
MSH6-206ENST00000455383 ALLCQ8N6M5 410 aa19.92■□□□□ 0.78
MSH6-206ENST00000455383 TXNDC5Q8NBS9 432 aaKnown RBP19.92■□□□□ 0.78
MSH6-206ENST00000455383 NOC3LQ8WTT2 800 aaKnown RBP19.92■□□□□ 0.78
MSH6-206ENST00000455383 PIGKQ92643 395 aa19.92■□□□□ 0.78
MSH6-206ENST00000455383 RALYQ9UKM9 306 aaKnown RBP19.92■□□□□ 0.78
MSH6-206ENST00000455383 ZMIZ1Q9ULJ6 1067 aa19.92■□□□□ 0.78
MSH6-206ENST00000455383 TNRC6BQ9UPQ9 1833 aaKnown RBP19.91■□□□□ 0.78
MSH6-206ENST00000455383 VPS37CA5D8V6 355 aaPredicted RBP19.91■□□□□ 0.78
MSH6-206ENST00000455383 KLF8O95600 359 aaPredicted RBP19.91■□□□□ 0.78
MSH6-206ENST00000455383 STAT6P42226 847 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 CACNA2D1P54289 1103 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 TAF10Q12962 218 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 RESTQ13127 1097 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 MAP7D1Q3KQU3 841 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 MDH1BQ5I0G3 518 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 TRAPPC11Q7Z392 1133 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 PHTF2Q8N3S3 785 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 GLIS3Q8NEA6 775 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 WHAMMQ8TF30 809 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 RLN3Q8WXF3 142 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 ADAM33Q9BZ11 813 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 KIAA1586Q9HCI6 787 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 TMEM30AQ9NV96 361 aa19.91■□□□□ 0.78
MSH6-206ENST00000455383 MBD1Q9UIS9 605 aaPredicted RBP19.91■□□□□ 0.78
MSH6-206ENST00000455383 ADAM23O75077 832 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 TOP3BO95985 862 aaKnown RBP19.9■□□□□ 0.78
MSH6-206ENST00000455383 CST3P01034 146 aaPredicted RBP19.9■□□□□ 0.78
MSH6-206ENST00000455383 APODP05090 189 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 SPINK2P20155 84 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 GNL1P36915 607 aaPredicted RBP19.9■□□□□ 0.78
MSH6-206ENST00000455383 TNFRSF4P43489 277 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 LMAN2Q12907 356 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 SPDYCQ5MJ68 293 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 EOGTQ5NDL2 527 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 EMC10Q5UCC4 262 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 PEAR1Q5VY43 1037 aaPredicted RBP19.9■□□□□ 0.78
MSH6-206ENST00000455383 TDRD10Q5VZ19 366 aaKnown RBP19.9■□□□□ 0.78
MSH6-206ENST00000455383 FAM173BQ6P4H8 233 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 LPCAT2Q7L5N7 544 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 DDX42Q86XP3 938 aaKnown RBP eCLIP19.9■□□□□ 0.78
MSH6-206ENST00000455383 CCDC65Q8IXS2 484 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 GATA6Q92908 595 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 MMS19Q96T76 1030 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 POLMQ9NP87 494 aaPredicted RBP19.9■□□□□ 0.78
MSH6-206ENST00000455383 TMEM74BQ9NUR3 256 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 SMPD4Q9NXE4 827 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 HSPBP1Q9NZL4 362 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 CFAP97Q9P2B7 532 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 ASPMQ8IZT6 3477 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 PLXND1Q9Y4D7 1925 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 FAM208BQ5VWN6 2430 aa19.9■□□□□ 0.78
MSH6-206ENST00000455383 TMEM8BA6NDV4 472 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 ADH1CP00326 375 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 PTPN1P18031 435 aaKnown RBP19.89■□□□□ 0.77
MSH6-206ENST00000455383 TIE1P35590 1138 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 GRIA2P42262 883 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 TRIM61Q5EBN2 209 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 STXBP4Q6ZWJ1 553 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 SYT12Q8IV01 421 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 FRMD1Q8N878 549 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 ZFRQ96KR1 1074 aaKnown RBP19.89■□□□□ 0.77
MSH6-206ENST00000455383 SPACA7Q96KW9 195 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 SLITRK1Q96PX8 696 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 DUSP9Q99956 384 aaKnown RBP19.89■□□□□ 0.77
MSH6-206ENST00000455383 PANK2Q9BZ23 570 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 ELOVL4Q9GZR5 314 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 ARHGEF4Q9NR80 690 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 TBC1D14Q9P2M4 693 aa19.89■□□□□ 0.77
MSH6-206ENST00000455383 ASCC3Q8N3C0 2202 aaKnown RBP19.88■□□□□ 0.77
MSH6-206ENST00000455383 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 E2F8A0AVK6 867 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.88■□□□□ 0.77
MSH6-206ENST00000455383 SCAMP3O14828 347 aaKnown RBP19.88■□□□□ 0.77
MSH6-206ENST00000455383 STAU1O95793 577 aaKnown RBP19.88■□□□□ 0.77
MSH6-206ENST00000455383 ADH5P11766 374 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 PDCP20941 246 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 DPP6P42658 865 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 PTGER3P43115 390 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 SLC39A14Q15043 492 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 SLC23A3Q6PIS1 610 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 EPM2AIP1Q7L775 607 aaPredicted RBP19.88■□□□□ 0.77
MSH6-206ENST00000455383 HS2ST1Q7LGA3 356 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 TTC30AQ86WT1 665 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 ETFBKMTQ8IXQ9 262 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 TMEFF1Q8IYR6 380 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 DEFB124Q8NES8 71 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 OR6B3Q8NGW1 331 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 ZNF507Q8TCN5 953 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 KCNV2Q8TDN2 545 aa19.88■□□□□ 0.77
MSH6-206ENST00000455383 OVCA2Q8WZ82 227 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms