RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 ADGRD2Q7Z7M1 963 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 NUP93Q8N1F7 819 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 TXLNBQ8N3L3 684 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 TTC9BQ8N6N2 239 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 IRGQQ8WZA9 623 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 C18orf8Q96DM3 657 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 MCRS1Q96EZ8 462 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 TRMT2BQ96GJ1 504 aaKnown RBP11.86□□□□□ -0.51
TRAF4-206ENST00000454852 ZNF830Q96NB3 372 aaPredicted RBP11.86□□□□□ -0.51
TRAF4-206ENST00000454852 NSUN3Q9H649 340 aaKnown RBP11.86□□□□□ -0.51
TRAF4-206ENST00000454852 TLE6Q9H808 572 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 CYP4F11Q9HBI6 524 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 CNGB3Q9NQW8 809 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 SEPT11Q9NVA2 429 aaKnown RBP11.86□□□□□ -0.51
TRAF4-206ENST00000454852 ASNSD1Q9NWL6 643 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 EHD2Q9NZN4 543 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 ADAM22Q9P0K1 906 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 SLC27A5Q9Y2P5 690 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 YIPF1Q9Y548 306 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 ASB3Q9Y575 518 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRAF4-206ENST00000454852 GREB1Q4ZG55 1949 aa11.86□□□□□ -0.51
TRAF4-206ENST00000454852 A0A0A6YYK5 440 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-206ENST00000454852 E5RJQ4 531 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 RFXAPO00287 272 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 PAPSS1O43252 624 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-206ENST00000454852 SART1O43290 800 aaKnown RBP11.85□□□□□ -0.51
TRAF4-206ENST00000454852 ZMYND10O75800 440 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 RTN3O95197 1032 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-206ENST00000454852 CYP1A2P05177 515 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 GLI1P08151 1106 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 HNRNPA1P09651 372 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRAF4-206ENST00000454852 CCDC175P0C221 793 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 SSTR3P32745 418 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-206ENST00000454852 ALDH1A3P47895 512 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 SLC5A3P53794 718 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 GALCP54803 685 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 GRIN2CQ14957 1233 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 PPP1R15BQ5SWA1 713 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 ZNF697Q5TEC3 545 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 LIN9Q5TKA1 542 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 PLEKHA7Q6IQ23 1121 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 ELMSAN1Q6PJG2 1045 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 MMS22LQ6ZRQ5 1243 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 DENND5BQ6ZUT9 1274 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 TOGARAM2Q6ZUX3 1019 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 BEND5Q7L4P6 421 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 XYLT1Q86Y38 959 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 C3orf20Q8ND61 904 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 CMASQ8NFW8 434 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-206ENST00000454852 CALR3Q96L12 384 aaKnown RBP11.85□□□□□ -0.51
TRAF4-206ENST00000454852 SEPT5Q99719 369 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-206ENST00000454852 FBXO44Q9H4M3 255 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 LRRC4Q9HBW1 653 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 ZDHHC7Q9NXF8 308 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 HCFC2Q9Y5Z7 792 aa11.85□□□□□ -0.51
TRAF4-206ENST00000454852 PRRG1O14668 218 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 MTA2O94776 668 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 ERBB2P04626 1255 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 C8AP07357 584 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 CSH1P0DML2 217 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 CSH2P0DML3 217 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 EPCAMP16422 314 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 HMGA1P17096 107 aaKnown RBP11.84□□□□□ -0.51
TRAF4-206ENST00000454852 CA8P35219 290 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 TKTL1P51854 596 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 HADHBP55084 474 aaKnown RBP11.84□□□□□ -0.51
TRAF4-206ENST00000454852 DAOAP59103 153 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 GPC5P78333 572 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 MRPS5P82675 430 aaKnown RBP11.84□□□□□ -0.51
TRAF4-206ENST00000454852 DDR2Q16832 855 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 SNX30Q5VWJ9 437 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 OLFML1Q6UWY5 402 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 SLC26A9Q7LBE3 791 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 GPRIN1Q7Z2K8 1008 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 ITIH5Q86UX2 942 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 SCN4BQ8IWT1 228 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 ZNF276Q8N554 614 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 EFHBQ8N7U6 833 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 ACRBPQ8NEB7 543 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 OVCA2Q8WZ82 227 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 PSMG2Q969U7 264 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 C11orf70Q9BRQ4 267 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 PRDM12Q9H4Q4 367 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 ST7Q9NRC1 585 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 DZANK1Q9NVP4 752 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 SCML2Q9UQR0 700 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 PPP2R2CQ9Y2T4 447 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 MTCH2Q9Y6C9 303 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 MYH10P35580 1976 aa11.84□□□□□ -0.51
TRAF4-206ENST00000454852 SIGLEC16A6NMB1 481 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 SLC38A8A6NNN8 435 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 TMCO5BA8MYB1 307 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 NCK2O43639 380 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 ZBED1O96006 694 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 ZDHHC11BP0C7U3 371 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 RRM1P23921 792 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 PPP3CCP48454 512 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 NRIP1P48552 1158 aa11.83□□□□□ -0.52
TRAF4-206ENST00000454852 GPR15P49685 360 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms