RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 VIPR2P41587 438 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 MAP3K7CLP57077 242 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 TAF10Q12962 218 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 KRT31Q15323 416 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 PKDCCQ504Y2 493 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 HSP90AA4PQ58FG1 418 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 TXNDC8Q6A555 127 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 TMEM270Q6UE05 265 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 HFE2Q6ZVN8 426 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 RRAGAQ7L523 313 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 RBBP8NLQ8NC74 664 aaPredicted RBP14.99□□□□□ -0.01
HDAC4-205ENST00000454542 PDZD8Q8NEN9 1154 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 SCAMP5Q8TAC9 235 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 RIN3Q8TB24 985 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 USP13Q92995 863 aaPredicted RBP14.99□□□□□ -0.01
HDAC4-205ENST00000454542 FAM81BQ96LP2 452 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 LRRC3BQ96PB8 259 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 SLITRK1Q96PX8 696 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 CRACR2AQ9BSW2 395 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 TRPV5Q9NQA5 729 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 TSPAN16Q9UKR8 245 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 KIAA1257Q9ULG3 409 aa14.99□□□□□ -0.01
HDAC4-205ENST00000454542 C2orf78A6NCI8 922 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 RNF225M0QZC1 329 aaPredicted RBP14.98□□□□□ -0.01
HDAC4-205ENST00000454542 VDRP11473 427 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 YWHAQP27348 245 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 TUBP50607 506 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 BCAT1P54687 386 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 GPC5P78333 572 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 APBA1Q02410 837 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 KCNMA1Q12791 1236 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 MEA1Q16626 185 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 ANO6Q4KMQ2 910 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 SGO2Q562F6 1265 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 RAB41Q5JT25 222 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 CWF19L1Q69YN2 538 aaKnown RBP14.98□□□□□ -0.01
HDAC4-205ENST00000454542 APTXQ7Z2E3 356 aaKnown RBP14.98□□□□□ -0.01
HDAC4-205ENST00000454542 MAB21L3Q8N8X9 362 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 ANKRD52Q8NB46 1076 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 SHC3Q92529 594 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 HEXIM2Q96MH2 286 aaKnown RBP14.98□□□□□ -0.01
HDAC4-205ENST00000454542 SLC22A12Q96S37 553 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 ZSWIM1Q9BR11 485 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 UBXN6Q9BZV1 441 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 FANCLQ9NW38 375 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 TAB2Q9NYJ8 693 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 TRPM5Q9NZQ8 1165 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 AJAP1Q9UKB5 411 aaPredicted RBP14.98□□□□□ -0.01
HDAC4-205ENST00000454542 PCDHB4Q9Y5E5 795 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 USP3Q9Y6I4 520 aa14.98□□□□□ -0.01
HDAC4-205ENST00000454542 TRAV19A0A0A6YYK7 116 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 KRBA1A5PL33 1030 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 BECN2A8MW95 431 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 PDGFBP01127 241 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-205ENST00000454542 CFHP08603 1231 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 PDE6CP51160 858 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 KIF11P52732 1056 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 PFKPQ01813 784 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 GRM2Q14416 872 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 STILQ15468 1287 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 ZNF77Q15935 545 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 GOLGA7BQ2TAP0 167 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 GJB7Q6PEY0 223 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 LCLAT1Q6UWP7 414 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 CCDC186Q7Z3E2 898 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 CREBRFQ8IUR6 639 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 CELF5Q8N6W0 485 aaKnown RBP14.97□□□□□ -0.01
HDAC4-205ENST00000454542 TFAP2BQ92481 460 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 FBXO32Q969P5 355 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 DDX23Q9BUQ8 820 aaKnown RBP14.97□□□□□ -0.01
HDAC4-205ENST00000454542 FBXO44Q9H4M3 255 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 UBE2TQ9NPD8 197 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-205ENST00000454542 ARHGEF3Q9NR81 526 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 GMIPQ9P107 970 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 LIMA1Q9UHB6 759 aaKnown RBP14.97□□□□□ -0.01
HDAC4-205ENST00000454542 ARHGAP26Q9UNA1 814 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.97□□□□□ -0.01
HDAC4-205ENST00000454542 SCML2Q9UQR0 700 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 CCL26Q9Y258 94 aa14.97□□□□□ -0.01
HDAC4-205ENST00000454542 SHISA7A6NL88 538 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 XPO1O14980 1071 aaKnown RBP14.96□□□□□ -0.01
HDAC4-205ENST00000454542 CHADO15335 359 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 LETM1O95202 739 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-205ENST00000454542 USP17L7P0C7H9 530 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 SETSIPP0DME0 302 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 CD19P15391 556 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 AVPR1AP37288 418 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 PLA2G4AP47712 749 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 SLC7A9P82251 487 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 BST2Q10589 180 aaKnown RBP14.96□□□□□ -0.01
HDAC4-205ENST00000454542 IER5LQ5T953 404 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 PIGZQ86VD9 579 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 DHX40Q8IX18 779 aaKnown RBP14.96□□□□□ -0.01
HDAC4-205ENST00000454542 FBXL6Q8N531 539 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 AOPEPQ8N6M6 819 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 KIAA1958Q8N8K9 716 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 BPIFB1Q8TDL5 484 aa14.96□□□□□ -0.01
HDAC4-205ENST00000454542 TRMT61BQ9BVS5 477 aaKnown RBP14.96□□□□□ -0.01
HDAC4-205ENST00000454542 SMG9Q9H0W8 520 aaKnown RBP14.96□□□□□ -0.01
HDAC4-205ENST00000454542 TDP1Q9NUW8 608 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms