RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, human

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-213	ENST00000454132	PSMA2	P25787	234 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	PEX2	P28328	305 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	ACTR3	P61158	418 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	DLGAP5	Q15398	846 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	ZACN	Q401N2	412 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	CIAPIN1	Q6FI81	312 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	DENND5B	Q6ZUT9	1274 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	ENOSF1	Q7L5Y1	443 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	USP37	Q86T82	979 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	PHF13	Q86YI8	300 aa	Predicted RBP	20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	MYLK4	Q86YV6	388 aa	Predicted RBP	20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	KIAA0319L	Q8IZA0	1049 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	20.45	■□□□□ 0.86	9e-7	■■■■□ 22.4
LMBR1-213	ENST00000454132	E2F7	Q96AV8	911 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	MASTL	Q96GX5	879 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	FBXL18	Q96ME1	805 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	LMCD1	Q9NZU5	365 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	CCDC160	A6NGH7	325 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	MMP8	P22894	467 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	RAP1GDS1	P52306	607 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	TCHHL1	Q5QJ38	904 aa	Predicted RBP	20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	MROH9	Q5TGP6	573 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	NUDCD3	Q8IVD9	361 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	NKD2	Q969F2	451 aa	Predicted RBP	20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	NGLY1	Q96IV0	654 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	IDI2	Q9BXS1	227 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	ADAMTS6	Q9UKP5	1117 aa		20.45	■□□□□ 0.86
LMBR1-213	ENST00000454132	TOM1L1	O75674	476 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	HOXA10	P31260	410 aa	Predicted RBP	20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	GMPR	P36959	345 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	EIF3E	P60228	445 aa	Known RBP	20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	DEUP1	Q05D60	604 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	RAB6C	Q53S08	254 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	GPAT2	Q6NUI2	795 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	C16orf46	Q6P387	395 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	CHURC1	Q8WUH1	139 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	RAB6C	Q9H0N0	254 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	MMADHC	Q9H3L0	296 aa	Predicted RBP	20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	SSU72	Q9NP77	194 aa	Known RBP	20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	SLC9A2	Q9UBY0	812 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	TAGLN3	Q9UI15	199 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	MYOCOS	A0A1B0GUC4	107 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	ZNF862	O60290	1169 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	CDK7	P50613	346 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	POLN	Q7Z5Q5	900 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	ARFGAP1	Q8N6T3	406 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	FAM81A	Q8TBF8	368 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	TMEM143	Q96AN5	459 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	PREB	Q9HCU5	417 aa		20.44	■□□□□ 0.86
LMBR1-213	ENST00000454132	RBP3	P10745	1247 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	SERPINB6	P35237	376 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	INHBC	P55103	352 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	MRPS5	P82675	430 aa	Known RBP	20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	DRICH1	Q6PGQ1	229 aa	Predicted RBP	20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	NET1	Q7Z628	596 aa	Predicted RBP	20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	ALKBH8	Q96BT7	664 aa	Known RBP	20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	NR1H4	Q96RI1	486 aa	Predicted RBP	20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	ST6GALNAC4	Q9H4F1	302 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	CNTN3	Q9P232	1028 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	SEPT9	Q9UHD8	586 aa	Predicted RBP	20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	MAGEC1	O60732	1142 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	C1QBP	Q07021	282 aa	Known RBP	20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	DPYSL3	Q14195	570 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	C15orf39	Q6ZRI6	1047 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	MARK2	Q7KZI7	788 aa	Known RBP	20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	OR6Y1	Q8NGX8	325 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	AZIN2	Q96A70	460 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	CENPK	Q9BS16	269 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	RBAK	Q9NYW8	714 aa	Predicted RBP	20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	AGO2	Q9UKV8	859 aa	Known RBP	20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	PCDHGB4	Q9UN71	923 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	PCDHGB5	Q9Y5G0	923 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	BUD23	O43709	281 aa	Known RBP	20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	DYNC1I2	Q13409	638 aa	Known RBP	20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	SWSAP1	Q6NVH7	229 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	C1orf228	Q6PIY5	440 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	SH2D5	Q6ZV89	423 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	SLC44A1	Q8WWI5	657 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	OPTN	Q96CV9	577 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	FAM192A	Q9GZU8	254 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	DDX43	Q9NXZ2	648 aa	Known RBP	20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	SLC17A6	Q9P2U8	582 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132	TMX2	Q9Y320	296 aa		20.43	■□□□□ 0.86
LMBR1-213	ENST00000454132		A0A088AWK7	358 aa		20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	TGDS	O95455	350 aa		20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	TRMT5	Q32P41	509 aa	Known RBP	20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	MTERF2	Q49AM1	385 aa		20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	CC2D2B	Q6DHV5	1058 aa		20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	DARS2	Q6PI48	645 aa	Known RBP	20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	DPH6	Q7L8W6	267 aa		20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	CHSY1	Q86X52	802 aa		20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	KCTD6	Q8NC69	237 aa		20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	SPATA18	Q8TC71	538 aa		20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	C3orf70	A6NLC5	250 aa	Predicted RBP	20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	HNRNPR	O43390	633 aa	Known RBP	20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	CRABP2	P29373	138 aa		20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	MSLN	Q13421	630 aa	Predicted RBP	20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	TRIP10	Q15642	601 aa		20.42	■□□□□ 0.86
LMBR1-213	ENST00000454132	GSTA3	Q16772	222 aa		20.42	■□□□□ 0.86

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