RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 CLNKQ7Z7G1 428 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 GATAD2AQ86YP4 633 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 MAPKAPK5Q8IW41 473 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 TMEM132CQ8N3T6 1108 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 ZNF808Q8N4W9 903 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 SPPL3Q8TCT6 385 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 TRIM63Q969Q1 353 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 FAM89AQ96GI7 184 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 WWC2-AS2Q96NR7 200 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 OSBPL9Q96SU4 736 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 ZSWIM1Q9BR11 485 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 DDX23Q9BUQ8 820 aaKnown RBP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 KRTAP17-1Q9BYP8 105 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 TP63Q9H3D4 680 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 HELLSQ9NRZ9 838 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 PDP2Q9P2J9 529 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 SRP68Q9UHB9 627 aaKnown RBP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 VPS51Q9UID3 782 aa4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 HERC5Q9UII4 1024 aaKnown RBP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 CNOT11Q9UKZ1 510 aaKnown RBP4.38□□□□□ -1.71
HMGB1P15-201ENST00000453854 A0A1B0GVC2 190 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 MYADML2A6NDP7 307 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 hCG_1984214I3L0E3 225 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 PCDH17O14917 1159 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 CD3EAPO15446 510 aaKnown RBP4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 ANP32CO43423 234 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 ASNA1O43681 348 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 ZNF623O75123 536 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 PIAS2O75928 621 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 ZFPL1O95159 310 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 GPANK1O95872 356 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 CFIP05156 583 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 HLA-DOAP06340 250 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 CSF1RP07333 972 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 ARP10275 920 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 ACO1P21399 889 aaKnown RBP4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 CALRP27797 417 aaKnown RBP4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 CST5P28325 142 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 NDUFV1P49821 464 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 ADAM17P78536 824 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 KRT17Q04695 432 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 SFRP4Q6FHJ7 346 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 GLB1LQ6UWU2 654 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 LAYNQ6UX15 382 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 MICALCLQ6ZW33 695 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 GDF7Q7Z4P5 450 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 OR1N1Q8NGS0 311 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 PPP2R3CQ969Q6 453 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 FUBP1Q96AE4 644 aaKnown RBP4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 SKA1Q96BD8 255 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 BOD1Q96IK1 185 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 MPP4Q96JB8 637 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 ZNF668Q96K58 619 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 UBXN10Q96LJ8 280 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 PRPF18Q99633 342 aaKnown RBP4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 TEX101Q9BY14 249 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 TMPRSS5Q9H3S3 457 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 CD248Q9HCU0 757 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 TMEM74BQ9NUR3 256 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 NDRG4Q9ULP0 352 aaKnown RBP4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 HPSEQ9Y251 543 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 SSX2IPQ9Y2D8 614 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 MRPS17Q9Y2R5 130 aaKnown RBP4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 MTO1Q9Y2Z2 717 aaKnown RBP4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 HS3ST4Q9Y661 456 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 FPGT-TNNI3KV9GXZ4 949 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 FER1L4A9Z1Z3 1794 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 NCAPD3P42695 1498 aa4.37□□□□□ -1.71
HMGB1P15-201ENST00000453854 GAGE12BA1L429 117 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 GAGE12HA6NDE8 117 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 NCAM2O15394 837 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 IRAK2O43187 625 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 EPB41L2O43491 1005 aaKnown RBP4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 RPS6KA4O75676 772 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 RNASEH2AO75792 299 aaKnown RBP4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 ITGA2BP08514 1039 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 VDRP11473 427 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 ITGALP20701 1170 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 MAPK9P45984 424 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 BCAT1P54687 386 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 RPS7P62081 194 aaKnown RBP4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 CXADRP78310 365 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 DDX10Q13206 875 aaKnown RBP4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 FHL3Q13643 280 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 ATP1A4Q13733 1029 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 EFR3AQ14156 821 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 RRP1BQ14684 758 aaKnown RBP4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 TAF5Q15542 800 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 CYP2A13Q16696 494 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 PTCHD3Q3KNS1 767 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 FBXO47Q5MNV8 452 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 CACHD1Q5VU97 1274 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 SP5Q6BEB4 398 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 ABLIM2Q6H8Q1 611 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 SULT6B1Q6IMI4 303 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 FOXR2Q6PJQ5 311 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 MOGAT3Q86VF5 341 aa4.36□□□□□ -1.71
HMGB1P15-201ENST00000453854 CNPY4Q8N129 248 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms