RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ZDHHC17Q8IUH5 632 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 C7orf61Q8IZ16 206 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 EMC1Q8N766 993 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 CEP112Q8N8E3 955 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 COLGALT1Q8NBJ5 622 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 ACTRT1Q8TDG2 376 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 RXFP2Q8WXD0 754 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 HERVK_113Q902F9 699 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 NDRG1Q92597 394 aaKnown RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 SMARCD1Q96GM5 515 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 CAPZA3Q96KX2 299 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 C11orf84Q9BUA3 381 aaPredicted RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 CARD9Q9H257 536 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 SYNCQ9H7C4 482 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 CHST7Q9NS84 486 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 KRT82Q9NSB4 513 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 SMARCAL1Q9NZC9 954 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 CXXC1Q9P0U4 656 aaPredicted RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 RNF14Q9UBS8 474 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 LCMT1Q9UIC8 334 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 TTC7AQ9ULT0 858 aaPredicted RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 MRPL42Q9Y6G3 142 aaKnown RBP6.31□□□□□ -1.4
SDC4P-201ENST00000453285 NOTCH4Q99466 2003 aa6.31□□□□□ -1.4
SDC4P-201ENST00000453285 CCDC66A2RUB6 948 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 OR6C75A6NL08 312 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 TNFRSF10BO14763 440 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ADAM12O43184 909 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 SPOPO43791 374 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 CEP104O60308 925 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 LRCH4O75427 683 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 GRAP2O75791 330 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 GJB5O95377 273 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 FYNP06241 537 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 PYGMP11217 842 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 SYN1P17600 705 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 LAG3P18627 525 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 GPD1P21695 349 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 CYP2F1P24903 491 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 PSMA2P25787 234 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 TKTL1P51854 596 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ZNF143P52747 638 aaPredicted RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 SNX16P57768 344 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 DAOAP59103 153 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 RNASE9P60153 205 aaKnown RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 MRPS5P82675 430 aaKnown RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 SLC25A11Q02978 314 aaKnown RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ITIH3Q06033 890 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 CKAP4Q07065 602 aaKnown RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ADIGQ0VDE8 80 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 GPR17Q13304 367 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ZNF211Q13398 564 aaPredicted RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 BTG3Q14201 252 aaPredicted RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ACAP1Q15027 740 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 USP41Q3LFD5 358 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 CCDC14Q49A88 953 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 CFAP221Q4G0U5 840 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ATP13A4Q4VNC1 1196 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 SLC39A12Q504Y0 691 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 RAB6CQ53S08 254 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 EFHC1Q5JVL4 640 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 SH3PXD2AQ5TCZ1 1133 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 RASIP1Q5U651 963 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 LRRC38Q5VT99 294 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 TXNRD3NBQ6F5E7 133 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 PM20D1Q6GTS8 502 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ZNF280DQ6N043 979 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 PRSS55Q6UWB4 352 aaPredicted RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 C4orf50Q6ZRC1 276 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ANKS3Q6ZW76 656 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 CYP4V2Q6ZWL3 525 aaPredicted RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 BNIPLQ7Z465 357 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ANKS1BQ7Z6G8 1248 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 SPATA2LQ8IUW3 424 aaPredicted RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 RHOT1Q8IXI2 618 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 DCP1BQ8IZD4 617 aaKnown RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ZDHHC14Q8IZN3 488 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 SCML4Q8N228 414 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 SPATA4Q8NEY3 305 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 SP7Q8TDD2 431 aaPredicted RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 PIK3R5Q8WYR1 880 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 TSC1Q92574 1164 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 CENPIQ92674 756 aaPredicted RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 FUBP3Q96I24 572 aaKnown RBP eCLIP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ZNF558Q96NG5 402 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 CNPY3Q9BT09 278 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 TTPALQ9BTX7 342 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 DDX23Q9BUQ8 820 aaKnown RBP6.3□□□□□ -1.4
SDC4P-201ENST00000453285 HERC2P3Q9BVR0 1158 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ADAM33Q9BZ11 813 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ULBP1Q9BZM6 244 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 RAB6CQ9H0N0 254 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 CRISPLD1Q9H336 500 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 LRRC4Q9HBW1 653 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 PNPLA8Q9NP80 782 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 ASNSD1Q9NWL6 643 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 MTRRQ9UBK8 725 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 PRKAG2Q9UGJ0 569 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 USTQ9Y2C2 406 aa6.3□□□□□ -1.4
SDC4P-201ENST00000453285 BACE2Q9Y5Z0 518 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms