RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 ADAM28Q9UKQ2 775 aa20.61■□□□□ 0.89
HIGD1A-204ENST00000452906 SF3B1O75533 1304 aaKnown RBP eCLIP20.6■□□□□ 0.897e-7■■■■■ 29.5
HIGD1A-204ENST00000452906 TCRBV5S1A1TA0A578 114 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 TMEM191CA6NGB0 347 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 TMEM110-MUSTN1A8MSY1 372 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 H3BQ06 376 aaPredicted RBP20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 KCNK3O14649 394 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 XPO1O14980 1071 aaKnown RBP20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 ITGB1P05556 798 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 FAM200BP0CF97 657 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 KRT3P12035 628 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 COMTP21964 271 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 ADORA2BP29275 332 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 BRCC3P46736 316 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 PLA2G4AP47712 749 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 YWHAHQ04917 246 aaPredicted RBP20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 ACAP1Q15027 740 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 TTC30AQ86WT1 665 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 XYLT1Q86Y38 959 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 KLHL23Q8NBE8 558 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 SLC2A14Q8TDB8 520 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 GOLGA1Q92805 767 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 MCRS1Q96EZ8 462 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 NCAPGQ9BPX3 1015 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 DUSP16Q9BY84 665 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 NRDE2Q9H7Z3 1164 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 FAN1Q9Y2M0 1017 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 NME7Q9Y5B8 376 aa20.6■□□□□ 0.89
HIGD1A-204ENST00000452906 CTIFO43310 598 aaKnown RBP20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 CCDC130P13994 396 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 NPR3P17342 541 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 LAG3P18627 525 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 GATMP50440 423 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 UBE3AQ05086 875 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 PDE4CQ08493 712 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 HYAL1Q12794 435 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 CAMK1Q14012 370 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 MDH1BQ5I0G3 518 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 INTS6LQ5JSJ4 861 aaKnown RBP20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 PPP1R15BQ5SWA1 713 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 CD300LGQ6UXG3 332 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 EP400NLQ6ZTU2 488 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 ZNF572Q7Z3I7 529 aaPredicted RBP20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 TMEM110Q86TL2 294 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 DCP1BQ8IZD4 617 aaKnown RBP20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 NIPA2Q8N8Q9 360 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 SPPL3Q8TCT6 385 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 SMARCD1Q96GM5 515 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 UBXN6Q9BZV1 441 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 CYTH4Q9UIA0 394 aa20.59■□□□□ 0.89
HIGD1A-204ENST00000452906 PSTPIP1O43586 416 aa20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 ERBB2P04626 1255 aa20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 IL9P15248 144 aa20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 COL9A1P20849 921 aa20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 ACAT1P24752 427 aaKnown RBP20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 CTNNA1P35221 906 aaKnown RBP20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 RPL34P49207 117 aaKnown RBP20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 CYP4A22Q5TCH4 519 aa20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 OR6B2Q6IFH4 312 aa20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 CCDC70Q6NSX1 233 aa20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 C4orf50Q6ZRC1 276 aa20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 FUKQ8N0W3 1084 aa20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 GJD3Q8N144 294 aa20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 UBXN4Q92575 508 aa20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 MCEEQ96PE7 176 aa20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 PRKAG3Q9UGI9 489 aa20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 PACSIN2Q9UNF0 486 aaPredicted RBP20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 PRG3Q9Y2Y8 225 aaPredicted RBP20.58■□□□□ 0.89
HIGD1A-204ENST00000452906 FAM170AA1A519 330 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 E5RJQ4 531 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 GOLGA8SH3BPF8 625 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 PGRMC1O00264 195 aaKnown RBP20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 NRP1O14786 923 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 SART1O43290 800 aaKnown RBP20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 SRGAP2O75044 1071 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 TADA3O75528 432 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 OAZ2O95190 189 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 DNAJB1P25685 340 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 LTBRP36941 435 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 C2CD6Q53TS8 623 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 FAM102AQ5T9C2 384 aaPredicted RBP20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 SEL1L2Q5TEA6 688 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 FAM35AQ86V20 835 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 CREG2Q8IUH2 290 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 RHOT1Q8IXI2 618 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 ACTRT1Q8TDG2 376 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 HASPINQ8TF76 798 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 POF1BQ8WVV4 589 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 KCTD13Q8WZ19 329 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 RABGGTAQ92696 567 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 CAPZA3Q96KX2 299 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 GOLPH3Q9H4A6 298 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 DNAJB4Q9UDY4 337 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 TTC7AQ9ULT0 858 aaPredicted RBP20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 PCDHA3Q9Y5H8 950 aa20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 TIMM13Q9Y5L4 95 aaPredicted RBP20.57■□□□□ 0.88
HIGD1A-204ENST00000452906 OR6C75A6NL08 312 aa20.56■□□□□ 0.88
HIGD1A-204ENST00000452906 H7C4K7 107 aa20.56■□□□□ 0.88
HIGD1A-204ENST00000452906 DDX3YO15523 660 aaKnown RBP20.56■□□□□ 0.88
HIGD1A-204ENST00000452906 FBXO21O94952 628 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms