RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 DUS2Q9NX74 493 aaKnown RBP13.26□□□□□ -0.29
CPSF4-208ENST00000452047 SMG5Q9UPR3 1016 aaKnown RBP13.26□□□□□ -0.29
CPSF4-208ENST00000452047 WNT6Q9Y6F9 365 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 CACNA1AO00555 2505 aa13.26□□□□□ -0.29
CPSF4-208ENST00000452047 ATP8B3O60423 1300 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 TNFRSF10BO14763 440 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 CLSTN1O94985 981 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 RPL13P26373 211 aaKnown RBP13.25□□□□□ -0.29
CPSF4-208ENST00000452047 GJA4P35212 333 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 GCLMP48507 274 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 NDST1P52848 882 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 SLC7A9P82251 487 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 DMWDQ09019 674 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 INCA1Q0VD86 236 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 EDRF1Q3B7T1 1238 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 NAIF1Q69YI7 327 aaPredicted RBP13.25□□□□□ -0.29
CPSF4-208ENST00000452047 PKN3Q6P5Z2 889 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 ACOT1Q86TX2 421 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 UNC93AQ86WB7 457 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 NUP93Q8N1F7 819 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 CRYBG2Q8N1P7 616 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 CPA6Q8N4T0 437 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 ENGASEQ8NFI3 743 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 TAS1R2Q8TE23 839 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 ATP2A3Q93084 1043 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 SMARCD1Q96GM5 515 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 SLITRK1Q96PX8 696 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 RNF38Q9H0F5 515 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 ECT2Q9H8V3 914 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 APOBEC3GQ9HC16 384 aaKnown RBP13.25□□□□□ -0.29
CPSF4-208ENST00000452047 FBRSL1Q9HCM7 1045 aaKnown RBP13.25□□□□□ -0.29
CPSF4-208ENST00000452047 DMAP1Q9NPF5 467 aaPredicted RBP13.25□□□□□ -0.29
CPSF4-208ENST00000452047 IL37Q9NZH6 218 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 ATG2BQ96BY7 2078 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 LAMA1P25391 3075 aa13.25□□□□□ -0.29
CPSF4-208ENST00000452047 FAM92AA1XBS5 289 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 LEFTY2O00292 366 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 RTN3O95197 1032 aaPredicted RBP13.24□□□□□ -0.29
CPSF4-208ENST00000452047 CCDC130P13994 396 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 YWHAQP27348 245 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 HOXC13P31276 330 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 PSMC2P35998 433 aaKnown RBP13.24□□□□□ -0.29
CPSF4-208ENST00000452047 IFNAR2P48551 515 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 SLC5A3P53794 718 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 NUCB2P80303 420 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 GRSF1Q12849 480 aaKnown RBP eCLIP13.24□□□□□ -0.29
CPSF4-208ENST00000452047 ORC1Q13415 861 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 ADAM9Q13443 819 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 COBLL1Q53SF7 1204 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 DCLK2Q8N568 766 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 KIAA1958Q8N8K9 716 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 TTC16Q8NEE8 873 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 ZMIZ2Q8NF64 920 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 SCAMP5Q8TAC9 235 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 SPATA20Q8TB22 786 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 OVCA2Q8WZ82 227 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 CCDC34Q96HJ3 373 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 TWNKQ96RR1 684 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 CSNK1G1Q9HCP0 422 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.24□□□□□ -0.293e-7■■■■■ 76.5
CPSF4-208ENST00000452047 KRT82Q9NSB4 513 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 CPQQ9Y646 472 aa13.24□□□□□ -0.29
CPSF4-208ENST00000452047 EML5Q05BV3 1969 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 AP1G2O75843 785 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 BEST1O76090 585 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 EGFP01133 1207 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 KRT13P13646 458 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 HOXA6P31267 233 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 PRCPP42785 496 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 GALK1P51570 392 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 AMPD2Q01433 879 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 IFRD2Q12894 506 aaPredicted RBP13.23□□□□□ -0.29
CPSF4-208ENST00000452047 GAB4Q2WGN9 574 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 SNX30Q5VWJ9 437 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 KIAA2013Q8IYS2 634 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 C12orf29Q8N999 325 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 PDZD8Q8NEN9 1154 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 SLC2A14Q8TDB8 520 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 EZH1Q92800 747 aaPredicted RBP13.23□□□□□ -0.29
CPSF4-208ENST00000452047 FBXO32Q969P5 355 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 EEF2KMTQ96G04 330 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 ZFRQ96KR1 1074 aaKnown RBP13.23□□□□□ -0.29
CPSF4-208ENST00000452047 GSDMAQ96QA5 445 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 SMOQ99835 787 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 P2RY13Q9BPV8 354 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 HINFPQ9BQA5 517 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 MED10Q9BTT4 135 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 IMPG2Q9BZV3 1241 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 NIF3L1Q9GZT8 377 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 LINC00597Q9H2U6 94 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 TMEM8AQ9HCN3 771 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 RMND1Q9NWS8 449 aa13.23□□□□□ -0.29
CPSF4-208ENST00000452047 CHURC1-FNTBB4DL54 471 aa13.22□□□□□ -0.29
CPSF4-208ENST00000452047 RNF40O75150 1001 aa13.22□□□□□ -0.29
CPSF4-208ENST00000452047 NFATC1O95644 943 aa13.22□□□□□ -0.29
CPSF4-208ENST00000452047 ABL1P00519 1130 aa13.22□□□□□ -0.29
CPSF4-208ENST00000452047 ZDHHC11BP0C7U3 371 aa13.22□□□□□ -0.29
CPSF4-208ENST00000452047 DRD1P21728 446 aa13.22□□□□□ -0.29
CPSF4-208ENST00000452047 GTF2H1P32780 548 aa13.22□□□□□ -0.29
CPSF4-208ENST00000452047 FNTBP49356 437 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms