RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 RAP1GDS1P52306 607 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 TMED2Q15363 201 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 CCDC153Q494R4 210 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 ZFYVE27Q5T4F4 411 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 DCAF15Q66K64 600 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 GJB7Q6PEY0 223 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 APOBEC3FQ8IUX4 373 aaKnown RBP14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 VPS50Q96JG6 964 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 LGALS13Q9UHV8 139 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 LRRC37A2A6NM11 1700 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 P4HBP07237 508 aaKnown RBP14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 SMIM18P0DKX4 95 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 PHBP35232 272 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 OAZ1P54368 228 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 C6orf183Q5T699 404 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 PASD1Q8IV76 773 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 PLEKHO2Q8TD55 490 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 KLHL4Q9C0H6 718 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 CYLDQ9NQC7 956 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 AAASQ9NRG9 546 aa14.04□□□□□ -0.16
SYNGAP1-204ENST00000449372 SORBS3O60504 671 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 SLC5A2P31639 672 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 NET1Q7Z628 596 aaPredicted RBP14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 ALDH16A1Q8IZ83 802 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 METTL25Q8N6Q8 603 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 OLIG1Q8TAK6 271 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 ALG3Q92685 438 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 TRPC7Q9HCX4 862 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 MRPL47Q9HD33 250 aaKnown RBP14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 GRID1Q9ULK0 1009 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 C15orf38-AP3S2A0A0A6YYH1 394 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 FOXN3O00409 490 aaPredicted RBP14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 PMM2O15305 246 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 ATP6V1B1P15313 513 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 DSG3P32926 999 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 MYLK3Q32MK0 819 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 TRMT5Q32P41 509 aaKnown RBP14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 TMEM63BQ5T3F8 832 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 PRAMEF18Q5VWM3 479 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 UGT2A3Q6UWM9 527 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 PACS1Q6VY07 963 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 ARPINQ7Z6K5 226 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 C12orf56Q8IXR9 622 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 CCDC110Q8TBZ0 833 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 ZNF398Q8TD17 642 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 EMSYQ7Z589 1322 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 CCNE2O96020 404 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 ABHD2P08910 425 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 RARBP10826 455 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 CHKAP35790 457 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 AQP4P55087 323 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 ARPC4P59998 168 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 MTMR1Q13613 665 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 PTK6Q13882 451 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 COG2Q14746 738 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 MAP3K21Q5TCX8 1036 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 ISLR2Q6UXK2 745 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 PPM1KQ8N3J5 372 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 DHX38Q92620 1227 aaKnown RBP14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 PPP1R10Q96QC0 940 aaKnown RBP14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 PANX3Q96QZ0 392 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 WRNIP1Q96S55 665 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 HEPHQ9BQS7 1158 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 RBM38Q9H0Z9 239 aaKnown RBP14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 AFG3L2Q9Y4W6 797 aa14.03□□□□□ -0.16
SYNGAP1-204ENST00000449372 RGS20O76081 388 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 KCNJ1P48048 391 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 CPA2P48052 419 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 RARRES1P49788 294 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 BTKQ06187 659 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 OVGP1Q12889 678 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 UGCGQ16739 394 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 ANKRD20A4Q4UJ75 823 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 C1orf146Q5VVC0 180 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 TRIM72Q6ZMU5 477 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 ZNF677Q86XU0 584 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 RFWD2Q8NHY2 731 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 ARHGEF26Q96DR7 871 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 SENP7Q9BQF6 1050 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 ANKFY1Q9P2R3 1169 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 AJAP1Q9UKB5 411 aaPredicted RBP14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 LZTS1Q9Y250 596 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 PPP2R3BQ9Y5P8 575 aa14.02□□□□□ -0.16
SYNGAP1-204ENST00000449372 H0YCG3 227 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 ADAM23O75077 832 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 TRIM49P0CI25 452 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 TRIM49CP0CI26 452 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 KRT15P19012 456 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 S100A1P23297 94 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 ACTR3P61158 418 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 C16orf72Q14CZ0 275 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 LPCAT4Q643R3 524 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 VSIG10LQ86VR7 867 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 OSBPL8Q9BZF1 889 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 TBC1D22BQ9NU19 505 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 RABL2BQ9UNT1 228 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 GPC6Q9Y625 555 aaPredicted RBP14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 B2RBV5 119 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 FSCN2O14926 492 aa14.02□□□□□ -0.17
SYNGAP1-204ENST00000449372 AP1G1O43747 822 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms