RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 SCAMP3O14828 347 aaKnown RBP13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 CLEC4FQ8N1N0 589 aa13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 ZSCAN18Q8TBC5 510 aaPredicted RBP13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 PAK5Q9P286 719 aa13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 SPRP35270 261 aaPredicted RBP13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 BCAT1P54687 386 aa13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 SGF29Q96ES7 293 aa13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 TRAV19A0A0A6YYK7 116 aa13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 CST8O60676 142 aa13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 TBX4P57082 545 aa13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 GSTA3Q16772 222 aa13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 LVRNQ6Q4G3 990 aa13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 METTL7BQ6UX53 244 aa13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 GET4Q7L5D6 327 aaPredicted RBP13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 FLCNQ8NFG4 579 aa13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 FEZF2Q8TBJ5 459 aa13.2□□□□□ -0.3
AC006001.3-201ENST00000449307 CPSF4O95639 269 aaKnown RBP13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 SOX10P56693 466 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 TMED1Q13445 227 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 FUT11Q495W5 492 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 FAXCQ5TGI0 409 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 MRNIPQ6NTE8 343 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 LUZP2Q86TE4 346 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 CXorf40AQ8TE69 158 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 CLIP3Q96DZ5 547 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 SHCBP1LQ9BZQ2 653 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 FBXO44Q9H4M3 255 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 RIC8BQ9NVN3 520 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 PCDHB2Q9Y5E7 798 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 PDS5AQ29RF7 1337 aaKnown RBP13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 PLA2R1Q13018 1463 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 WNT10BO00744 389 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 MTSS1O43312 755 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 ENO3P13929 434 aaPredicted RBP13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 SETMARQ53H47 684 aaPredicted RBP13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 OTOAQ7RTW8 1153 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 GAS2L3Q86XJ1 694 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 B3GALNT2Q8NCR0 500 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 DNERQ8NFT8 737 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 MTA3Q9BTC8 594 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 ATP5BP06576 529 aaKnown RBP13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 ZNF200P98182 395 aaPredicted RBP13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 INPP5AQ14642 412 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 CCDC149Q6ZUS6 474 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 MARK2Q7KZI7 788 aaKnown RBP13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 SLC20A1Q8WUM9 679 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 TRAPPC12Q8WVT3 735 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 ABCB6Q9NP58 842 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 TRPC4Q9UBN4 977 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 MARCOQ9UEW3 520 aaPredicted RBP13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 DDTLA6NHG4 134 aaPredicted RBP13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 CXCL8P10145 99 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 PTPN3P26045 913 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 OR1E1P30953 314 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 GJB7Q6PEY0 223 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 TXNRD3Q86VQ6 643 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 CLTCL1P53675 1640 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 TTC26A0AVF1 554 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 SH3BGRP55822 239 aaPredicted RBP13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 ZNF697Q5TEC3 545 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 SGMS1Q86VZ5 419 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 BBS7Q8IWZ6 715 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 LGI2Q8N0V4 545 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 VTA1Q9NP79 307 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 RNF19AQ9NV58 838 aa13.19□□□□□ -0.3
AC006001.3-201ENST00000449307 MROH7Q68CQ1 1323 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 CRTAMO95727 393 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 ENO1P06733 434 aaKnown RBP13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 MUTP22033 750 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 MMP14P50281 582 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 EXD1Q8NHP7 514 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 GRIN3AQ8TCU5 1115 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 WNK4Q96J92 1243 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 TRIM9Q9C026 710 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 ASAH2Q9NR71 780 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 CDC42BPBQ9Y5S2 1711 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 MGAT4DA6NG13 374 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 ERFP50548 548 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 ALDH5A1P51649 535 aaPredicted RBP13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 KCNK10P57789 538 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 TEX9Q8N6V9 391 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 SYT15Q9BQS2 421 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 RUSC1Q9BVN2 902 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 NEUROD4Q9HD90 331 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 RPRD1BQ9NQG5 326 aaKnown RBP13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 NDE1Q9NXR1 346 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 BYSLQ13895 437 aaKnown RBP13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 FBXO47Q5MNV8 452 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 PCNX4Q63HM2 1172 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 FICDQ9BVA6 458 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 AGO4Q9HCK5 861 aaKnown RBP13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 GPATCH2LQ9NWQ4 482 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 TNFSF13BQ9Y275 285 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 KRT8P05787 483 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 TGM2P21980 687 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 GEMIN4P57678 1058 aaKnown RBP13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 PPATQ06203 517 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 MS4A14Q96JA4 679 aa13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 MRPL1Q9BYD6 325 aaKnown RBP13.18□□□□□ -0.3
AC006001.3-201ENST00000449307 AMACRQ9UHK6 382 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms