RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 EHD2Q9NZN4 543 aa14.93□□□□□ -0.02
RTFDC1-204ENST00000449062 TRPM5Q9NZQ8 1165 aa14.93□□□□□ -0.02
RTFDC1-204ENST00000449062 TRAV19A0A0A6YYK7 116 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 PROB1E7EW31 1015 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 AP1G2O75843 785 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 RTN3O95197 1032 aaPredicted RBP14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 OAS1P00973 400 aaKnown RBP14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 USP17L7P0C7H9 530 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 YWHAQP27348 245 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 SOX9P48436 509 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 FMO5P49326 533 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 PGFP49763 221 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 RAD23BP54727 409 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 STX17P56962 302 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 SLC7A9P82251 487 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 UBXN2BQ14CS0 331 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 ANGPT1Q15389 498 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 ZNF77Q15935 545 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 TCERG1LQ5VWI1 586 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 C1orf210Q8IVY1 113 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 TRIM59Q8IWR1 403 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 SLC4A11Q8NBS3 891 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 FAM3CQ92520 227 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 CYFIP2Q96F07 1278 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 SMARCD1Q96GM5 515 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 DMAP1Q9NPF5 467 aaPredicted RBP14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 CISHQ9NSE2 258 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 LMBRD1Q9NUN5 540 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 FAM49BQ9NUQ9 324 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 FAM86C1Q9NVL1 165 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 THG1LQ9NWX6 298 aaKnown RBP14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 CHORDC1Q9UHD1 332 aaPredicted RBP14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 ARHGAP26Q9UNA1 814 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 MRPS17Q9Y2R5 130 aaKnown RBP14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 ANAPC1Q9H1A4 1944 aa14.92□□□□□ -0.02
RTFDC1-204ENST00000449062 USP34Q70CQ2 3546 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 OTOGLQ3ZCN5 2332 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 BICDL2A1A5D9 508 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 CHRNB1P11230 501 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 CD58P19256 250 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 NBL1P41271 181 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 PAK1Q13153 545 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 DCAF17Q5H9S7 520 aaPredicted RBP14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 CLEC20AQ6ZU45 233 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 RALGPS2Q86X27 583 aaPredicted RBP14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 IRF2BP1Q8IU81 584 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 TTC39CQ8N584 583 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 OVCA2Q8WZ82 227 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 ATOH1Q92858 354 aaPredicted RBP14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 MED10Q9BTT4 135 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 SRRTQ9BXP5 876 aaKnown RBP14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 LINC00597Q9H2U6 94 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 CLSTN2Q9H4D0 955 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 TRPC7Q9HCX4 862 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 KRT82Q9NSB4 513 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 CTNND2Q9UQB3 1225 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 NUP210Q8TEM1 1887 aaPredicted RBP14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 ATP8B3O60423 1300 aa14.91□□□□□ -0.02
RTFDC1-204ENST00000449062 SPECC1L-ADORA2AF8WAN1 911 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 RFX1P22670 979 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 CTHP32929 405 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 MAGEA9P43362 315 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 SLC5A3P53794 718 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 MAP3K7CLP57077 242 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 USP4Q13107 963 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 RUNX3Q13761 415 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 GAS6Q14393 721 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 ITPRIPL2Q3MIP1 535 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 PPP1R26Q5T8A7 1209 aaPredicted RBP14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 TRIM68Q6AZZ1 485 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 GPRIN1Q7Z2K8 1008 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 KIAA1958Q8N8K9 716 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 CCDC150Q8NCX0 1101 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 TTC8Q8TAM2 541 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 CSGALNACT1Q8TDX6 532 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 SH3RF2Q8TEC5 729 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 MSANTD3Q96H12 275 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 SLITRK1Q96PX8 696 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 DUSP16Q9BY84 665 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 LMAN1LQ9HAT1 526 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 RWDD2AQ9UIY3 292 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 OBSL1O75147 1896 aa14.9□□□□□ -0.02
RTFDC1-204ENST00000449062 ZNF638Q14966 1978 aaKnown RBP14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 NCAM2O15394 837 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 P4HA2O15460 535 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 GNA14O95837 355 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 CKMP06732 381 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 ARSAP15289 507 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 ACO1P21399 889 aaKnown RBP14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 ADORA2BP29275 332 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 MRE11P49959 708 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 KPNA1P52294 538 aaPredicted RBP14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 CUL2Q13617 745 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 MTF1Q14872 753 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 PDGFRLQ15198 375 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 EML3Q32P44 896 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 ZNF394Q53GI3 561 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 ARHGAP17Q68EM7 881 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 C1orf228Q6PIY5 440 aa14.89□□□□□ -0.03
RTFDC1-204ENST00000449062 ALYREFQ86V81 257 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms