RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 USP20Q9Y2K6 914 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SLC27A5Q9Y2P5 690 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SVILO95425 2214 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 FAM205CA6NFA0 338 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 BUB1O43683 1085 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 MED24O75448 989 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 ERN1O75460 977 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZNF24P17028 368 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 GLRA2P23416 452 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 AKT2P31751 481 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 GRM5P41594 1212 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 ACAP2Q15057 778 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 PPP2R5EQ16537 467 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZNF284Q2VY69 593 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZC2HC1CQ53FD0 456 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.88□□□□□ -1.472e-10■■□□□ 11.6
CDC42BPA-209ENST00000448940 TMEM60Q9H2L4 133 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 DPEP2Q9H4A9 486 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 NXF3Q9H4D5 531 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 TBC1D17Q9HA65 648 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 TMEM9BQ9NQ34 198 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 DNAJC28Q9NX36 388 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 PHTF1Q9UMS5 762 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZDBF2Q9HCK1 2354 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 MYO10Q9HD67 2058 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 H3BRJ5 948 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 RHOCP08134 193 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 EEF1GP26641 437 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 BCAT1P54687 386 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 FGL2Q14314 439 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 TARBP2Q15633 366 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 LYSMD4Q5XG99 296 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SLC36A4Q6YBV0 504 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 RNF168Q8IYW5 571 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 GPR135Q8IZ08 494 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SYCE1Q8N0S2 351 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 NECAB3Q96P71 396 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 ASB2Q96Q27 587 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 PAK6Q9NQU5 681 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 ARHGEF3Q9NR81 526 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 UTP6Q9NYH9 597 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SUN2Q9UH99 717 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SPTBN2O15020 2390 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 TMEM150BA6NC51 233 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 CFAP99D6REC4 459 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 DFFAO00273 331 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 CASKO14936 926 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 HNRNPA1P09651 372 aaKnown RBP eCLIP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SAT1P21673 171 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 PBX3P40426 434 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SULT1E1P49888 294 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 DOK6Q6PKX4 331 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 TRIM72Q6ZMU5 477 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 WDR49Q8IV35 697 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 C18orf8Q96DM3 657 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 MRPL38Q96DV4 380 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SLC38A3Q99624 504 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 ADAMTS10Q9H324 1103 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 FEZ2Q9UHY8 353 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SLC39A10Q9ULF5 831 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 HBS1LQ9Y450 684 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 PLIN4Q96Q06 1357 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 NPHP3-ACAD11A0A0J9YXS1 232 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 ANO9A1A5B4 782 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 C9J4A7 227 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 NRP1O14786 923 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 PRPF4O43172 522 aaKnown RBP eCLIP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SLITRK3O94933 977 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 TPI1P60174 286 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 CAPSQ13938 189 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 TRAPPC11Q7Z392 1133 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 DNAAF3Q8N9W5 541 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 USP13Q92995 863 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 CNDP1Q96KN2 507 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 TMEM51Q9NW97 253 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 DDIT4Q9NX09 232 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 SUCOQ9UBS9 1254 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 DMTF1Q9Y222 760 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 ALG6Q9Y672 507 aa5.88□□□□□ -1.47
CDC42BPA-209ENST00000448940 IGKV6D-41A0A0C4DH26 115 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 DCDC2BA2VCK2 349 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 MYADML2A6NDP7 307 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 EPB42P16452 691 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 RPL17P18621 184 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 BDNFP23560 247 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ALDH4A1P30038 563 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 PBLDP30039 288 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 MRE11P49959 708 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 FAM193AP78312 1265 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 SPEM2Q0P670 501 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ST3GAL2Q16842 350 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 MAP7D1Q3KQU3 841 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 HSP90B2PQ58FF3 399 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 DCAF6Q58WW2 860 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 CYP4X1Q8N118 509 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ALLCQ8N6M5 410 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 KCTD6Q8NC69 237 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 ASAP3Q8TDY4 903 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 FOXJ1Q92949 421 aa5.87□□□□□ -1.47
CDC42BPA-209ENST00000448940 PAGE5Q96GU1 130 aa5.87□□□□□ -1.47
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