RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 LACTBL1A8MY62 500 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 COILP38432 576 aaPredicted RBP18.49■□□□□ 0.55
ATG9A-215ENST00000446716 STX3Q13277 289 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 NT5DC4Q86YG4 428 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 CCDC60Q8IWA6 550 aaPredicted RBP18.49■□□□□ 0.55
ATG9A-215ENST00000446716 BRSK2Q8IWQ3 736 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 PDGFDQ9GZP0 370 aaPredicted RBP18.49■□□□□ 0.55
ATG9A-215ENST00000446716 FRMPD4Q14CM0 1322 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 UMODL1Q5DID0 1318 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 PPLO60437 1756 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 CCR1P32246 355 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 TUFMP49411 452 aaKnown RBP18.49■□□□□ 0.55
ATG9A-215ENST00000446716 DENND5BQ6ZUT9 1274 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 TMEM199Q8N511 208 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 ERP44Q9BS26 406 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 CELF4Q9BZC1 486 aaKnown RBP18.49■□□□□ 0.55
ATG9A-215ENST00000446716 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.49■□□□□ 0.55
ATG9A-215ENST00000446716 ADAM21Q9UKJ8 722 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 MROH2AA6NES4 1674 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 RNF103-CHMP3A0A140T963 221 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 F8VZ95 297 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 MEFVO15553 781 aaPredicted RBP18.49■□□□□ 0.55
ATG9A-215ENST00000446716 RAD51CO43502 376 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 TGM2P21980 687 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 SH3BGRP55822 239 aaPredicted RBP18.49■□□□□ 0.55
ATG9A-215ENST00000446716 EARS2Q5JPH6 523 aaKnown RBP18.49■□□□□ 0.55
ATG9A-215ENST00000446716 AARS2Q5JTZ9 985 aaKnown RBP18.49■□□□□ 0.55
ATG9A-215ENST00000446716 FBXL16Q8N461 479 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 SMARCD1Q96GM5 515 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 PNMA5Q96PV4 448 aa18.49■□□□□ 0.55
ATG9A-215ENST00000446716 TMEM88BA6NKF7 163 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 ALDH1A2O94788 518 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 ACADMP11310 421 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 YWHAQP27348 245 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 SLC47A2Q86VL8 602 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 ARL8AQ96BM9 186 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 WNK4Q96J92 1243 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 DMAP1Q9NPF5 467 aaPredicted RBP18.48■□□□□ 0.55
ATG9A-215ENST00000446716 TRMT6Q9UJA5 497 aaKnown RBP18.48■□□□□ 0.55
ATG9A-215ENST00000446716 RECQL4O94761 1208 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 RETSATQ6NUM9 610 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 UGT3A1Q6NUS8 523 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 TATDN2Q93075 761 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 GRAMD1AQ96CP6 724 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 USP18Q9UMW8 372 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 C5orf58C9J3I9 102 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 CHUKO15111 745 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 DDHD2O94830 711 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 PDCD2Q16342 344 aaPredicted RBP18.48■□□□□ 0.55
ATG9A-215ENST00000446716 CCDC33Q8N5R6 958 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 PSD3Q9NYI0 1048 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 SNCAIPQ9Y6H5 919 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 RPS6KL1Q9Y6S9 549 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 CRY2Q49AN0 593 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 TFDP3Q5H9I0 405 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 MSRAQ9UJ68 235 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.48■□□□□ 0.55
ATG9A-215ENST00000446716 ZMYM2Q9UBW7 1377 aa18.48■□□□□ 0.55
ATG9A-215ENST00000446716 CARSP49589 748 aaKnown RBP18.47■□□□□ 0.55
ATG9A-215ENST00000446716 ELOVL4Q9GZR5 314 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 KIF17Q9P2E2 1029 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 CTCFP49711 727 aaPredicted RBP18.47■□□□□ 0.55
ATG9A-215ENST00000446716 CCL23P55773 120 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 TBX4P57082 545 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 ABRAQ8N0Z2 381 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 NRBF2Q96F24 287 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 FRMD8P1Q9BZ68 369 aaPredicted RBP18.47■□□□□ 0.55
ATG9A-215ENST00000446716 NMRK2Q9NPI5 230 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 CDY2AQ9Y6F7 541 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 GTPBP10A4D1E9 387 aaKnown RBP18.47■□□□□ 0.55
ATG9A-215ENST00000446716 JCHAINP01591 159 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 ADIGQ0VDE8 80 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 POTEAQ6S8J7 498 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 RFWD2Q8NHY2 731 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 CARNS1A5YM72 827 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 HNRNPCL2B2RXH8 293 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 HNRNPCL1O60812 293 aaKnown RBP18.47■□□□□ 0.55
ATG9A-215ENST00000446716 LMNAP02545 664 aaKnown RBP18.47■□□□□ 0.55
ATG9A-215ENST00000446716 EIF4BP23588 611 aaKnown RBP18.47■□□□□ 0.55
ATG9A-215ENST00000446716 HIST2H2ACQ16777 129 aaPredicted RBP18.47■□□□□ 0.55
ATG9A-215ENST00000446716 HIST2H2AA3Q6FI13 130 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 KLRG1Q96E93 195 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 ZBTB45Q96K62 511 aaPredicted RBP18.47■□□□□ 0.55
ATG9A-215ENST00000446716 TFR2Q9UP52 801 aa18.47■□□□□ 0.55
ATG9A-215ENST00000446716 MZF1P28698 734 aaPredicted RBP18.46■□□□□ 0.55
ATG9A-215ENST00000446716 FNTAP49354 379 aa18.46■□□□□ 0.55
ATG9A-215ENST00000446716 TMEM119Q4V9L6 283 aa18.46■□□□□ 0.55
ATG9A-215ENST00000446716 SGO1Q5FBB7 561 aa18.46■□□□□ 0.55
ATG9A-215ENST00000446716 KLF6Q99612 283 aaPredicted RBP18.46■□□□□ 0.55
ATG9A-215ENST00000446716 ING2Q9H160 280 aa18.46■□□□□ 0.55
ATG9A-215ENST00000446716 MROH7Q68CQ1 1323 aa18.46■□□□□ 0.55
ATG9A-215ENST00000446716 H0Y3Z8 333 aa18.46■□□□□ 0.55
ATG9A-215ENST00000446716 ZBTB39O15060 712 aa18.46■□□□□ 0.55
ATG9A-215ENST00000446716 SRP72O76094 671 aaKnown RBP18.46■□□□□ 0.55
ATG9A-215ENST00000446716 ITGALP20701 1170 aa18.46■□□□□ 0.55
ATG9A-215ENST00000446716 LRRC8EQ6NSJ5 796 aa18.46■□□□□ 0.55
ATG9A-215ENST00000446716 ANLNQ9NQW6 1124 aa18.46■□□□□ 0.55
ATG9A-215ENST00000446716 UXTQ9UBK9 157 aaPredicted RBP18.46■□□□□ 0.55
ATG9A-215ENST00000446716 SMIM10L2AP0DMW4 78 aa18.46■□□□□ 0.55
ATG9A-215ENST00000446716 SMIM10L2BP0DMW5 78 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms