RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 E7ENQ6 273 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 TGM2P21980 687 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 GNL1P36915 607 aaPredicted RBP17.28■□□□□ 0.36
TCOF1-206ENST00000445265 RAP1GAPP47736 663 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 NOMO3P69849 1222 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 DCAF4L1Q3SXM0 396 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 SLC45A4Q5BKX6 768 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 CCDC60Q8IWA6 550 aaPredicted RBP17.28■□□□□ 0.36
TCOF1-206ENST00000445265 SCUBE1Q8IWY4 988 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 ST6GALNAC4Q9H4F1 302 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 TASP1Q9H6P5 420 aa17.28■□□□□ 0.36
TCOF1-206ENST00000445265 UNC5CO95185 931 aa17.27■□□□□ 0.36
TCOF1-206ENST00000445265 KPNB1Q14974 876 aaKnown RBP17.27■□□□□ 0.36
TCOF1-206ENST00000445265 NBPF12Q5TAG4 269 aaPredicted RBP17.27■□□□□ 0.36
TCOF1-206ENST00000445265 PPHLN1Q8NEY8 458 aaKnown RBP17.27■□□□□ 0.36
TCOF1-206ENST00000445265 HAUS8Q9BT25 410 aa17.27■□□□□ 0.36
TCOF1-206ENST00000445265 EML4Q9HC35 981 aaKnown RBP17.27■□□□□ 0.36
TCOF1-206ENST00000445265 SNED1Q8TER0 1413 aa17.27■□□□□ 0.36
TCOF1-206ENST00000445265 ZSCAN5DPP0CG00 497 aa17.27■□□□□ 0.36
TCOF1-206ENST00000445265 PNPLA4P41247 253 aa17.27■□□□□ 0.36
TCOF1-206ENST00000445265 PRAMEP78395 509 aa17.27■□□□□ 0.36
TCOF1-206ENST00000445265 SV2CQ496J9 727 aa17.27■□□□□ 0.36
TCOF1-206ENST00000445265 OR6J1Q8NGC5 347 aa17.27■□□□□ 0.36
TCOF1-206ENST00000445265 INPP5FQ9Y2H2 1132 aa17.27■□□□□ 0.36
TCOF1-206ENST00000445265 ENO4A6NNW6 628 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 MAP3K6O95382 1288 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 PTGER2P43116 358 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 AQP5P55064 265 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 LRRC36Q1X8D7 754 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 ALLCQ8N6M5 410 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 TLCD1Q96CP7 247 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 C20orf96Q9NUD7 363 aaPredicted RBP17.27■□□□□ 0.35
TCOF1-206ENST00000445265 PDP2Q9P2J9 529 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 LOC100653049A0A140TA62 436 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 MAGEA13PA6NCF6 341 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 KRT34O76011 436 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 SETSIPP0DME0 302 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 CXCL8P10145 99 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 ADRA1DP25100 572 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 LACTB2Q53H82 288 aaPredicted RBP17.27■□□□□ 0.35
TCOF1-206ENST00000445265 PALB2Q86YC2 1186 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 OR6P1Q8NGX9 317 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 GPATCH2LQ9NWQ4 482 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 TAGLN3Q9UI15 199 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 RPS6KL1Q9Y6S9 549 aa17.27■□□□□ 0.35
TCOF1-206ENST00000445265 NEMP1O14524 444 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 APOA4P06727 396 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 SHROOM1Q2M3G4 852 aaPredicted RBP17.26■□□□□ 0.35
TCOF1-206ENST00000445265 TDRD10Q5VZ19 366 aaKnown RBP17.26■□□□□ 0.35
TCOF1-206ENST00000445265 ACOT1Q86TX2 421 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 SEMA4DQ92854 862 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 UBQLN1Q9UMX0 589 aaKnown RBP17.26■□□□□ 0.35
TCOF1-206ENST00000445265 KIF13AQ9H1H9 1805 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 KBTBD13C9JR72 458 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 CALCAP01258 141 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 GRK2P25098 689 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 XRCC4Q13426 336 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 BTBD10Q9BSF8 475 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 NUP188Q5SRE5 1749 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 ACKR2O00590 384 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 SLC4A1P02730 911 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 PDK4Q16654 411 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 SCN4BQ8IWT1 228 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 SLC16A10Q8TF71 515 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 ZC3H15Q8WU90 426 aaKnown RBP17.26■□□□□ 0.35
TCOF1-206ENST00000445265 ARHGAP26Q9UNA1 814 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 STXBP5LQ9Y2K9 1186 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 GNGT2O14610 69 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 TRMT5Q32P41 509 aaKnown RBP17.26■□□□□ 0.35
TCOF1-206ENST00000445265 NOTUMQ6P988 496 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 TMEM237Q96Q45 408 aa17.26■□□□□ 0.35
TCOF1-206ENST00000445265 BARX2Q9UMQ3 279 aaPredicted RBP17.26■□□□□ 0.35
TCOF1-206ENST00000445265 DFFAO00273 331 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 ITGAVP06756 1048 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 KDELR1P24390 212 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 MIPP30301 263 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 RPA3P35244 121 aaPredicted RBP17.25■□□□□ 0.35
TCOF1-206ENST00000445265 BTBD8Q5XKL5 378 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 NAPEPLDQ6IQ20 393 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 TMPRSS6Q8IU80 811 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 STK32AQ8WU08 396 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 PTPRN2Q92932 1015 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 A1CFQ9NQ94 594 aaKnown RBP17.25■□□□□ 0.35
TCOF1-206ENST00000445265 GRIN2DO15399 1336 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 LAMB4A4D0S4 1761 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 SIGLEC16A6NMB1 481 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 AIM2O14862 343 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 ATP9AO75110 1047 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 MTA2O94776 668 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 NPTXRO95502 500 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 ENO3P13929 434 aaPredicted RBP17.25■□□□□ 0.35
TCOF1-206ENST00000445265 DENND5BQ6ZUT9 1274 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 ZNF398Q8TD17 642 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 PPP1R2P1Q96PQ5 205 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 ASB7Q9H672 318 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 TSHRP16473 764 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 YWHAHQ04917 246 aaPredicted RBP17.25■□□□□ 0.35
TCOF1-206ENST00000445265 RNF135Q8IUD6 432 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 AGAP11Q8TF27 550 aa17.25■□□□□ 0.35
TCOF1-206ENST00000445265 IFT43Q96FT9 208 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms