RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 NAP1L5Q96NT1 182 aaPredicted RBP14.88□□□□□ -0.03
SSBP3-208ENST00000444533 TTLL2Q9BWV7 592 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 NAA15Q9BXJ9 866 aaKnown RBP14.88□□□□□ -0.03
SSBP3-208ENST00000444533 NACA2Q9H009 215 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 GANQ9H2C0 597 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 TASP1Q9H6P5 420 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 TRPC7Q9HCX4 862 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 ZNF334Q9HCZ1 680 aaPredicted RBP14.88□□□□□ -0.03
SSBP3-208ENST00000444533 TLR8Q9NR97 1041 aaKnown RBP14.88□□□□□ -0.03
SSBP3-208ENST00000444533 IGSF9Q9P2J2 1179 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 EPS15L1Q9UBC2 864 aa14.88□□□□□ -0.03
SSBP3-208ENST00000444533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.88□□□□□ -0.03
SSBP3-208ENST00000444533 C2orf16Q68DN1 1984 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 TRAV19A0A0A6YYK7 116 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 BEST1O76090 585 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 GFPT2O94808 682 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 PFKLP17858 780 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 ACADSBP45954 432 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 PDE4CQ08493 712 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 TAF10Q12962 218 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 GAREM2Q75VX8 874 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 PIGZQ86VD9 579 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 MSANTD4Q8NCY6 345 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 SHKBP1Q8TBC3 707 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 TFAP2BQ92481 460 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 MYADMQ96S97 322 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 LRRC3Q9BY71 257 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 EDEM3Q9BZQ6 932 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 NUCKS1Q9H1E3 243 aaKnown RBP14.87□□□□□ -0.03
SSBP3-208ENST00000444533 ZFP14Q9HCL3 533 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 ST7Q9NRC1 585 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 LIMD1Q9UGP4 676 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 MYO6Q9UM54 1294 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 MYH10P35580 1976 aa14.87□□□□□ -0.03
SSBP3-208ENST00000444533 F11P03951 625 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 CYP11B1P15538 503 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 FERP16591 822 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 GJA1P17302 382 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 CCR2P41597 374 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 PLA2G4AP47712 749 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 PSEN1P49768 467 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 CYP4F8P98187 520 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 SLC47A2Q86VL8 602 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 TTC30AQ86WT1 665 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 ZNF677Q86XU0 584 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 ZMIZ2Q8NF64 920 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 SCAMP5Q8TAC9 235 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 ZSCAN18Q8TBC5 510 aaPredicted RBP14.86□□□□□ -0.03
SSBP3-208ENST00000444533 SMARCD2Q92925 531 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 SECISBP2LQ93073 1101 aaKnown RBP14.86□□□□□ -0.03
SSBP3-208ENST00000444533 HSFY1Q96LI6 401 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 CDK5RAP1Q96SZ6 601 aaKnown RBP14.86□□□□□ -0.03
SSBP3-208ENST00000444533 TRIM5Q9C035 493 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 MIS12Q9H081 205 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 SYNCQ9H7C4 482 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 SCML2Q9UQR0 700 aa14.86□□□□□ -0.03
SSBP3-208ENST00000444533 C19orf67A6NJJ6 358 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 TNFRSF10BO14763 440 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 SART1O43290 800 aaKnown RBP14.85□□□□□ -0.03
SSBP3-208ENST00000444533 FBXO21O94952 628 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 CKMP06732 381 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 USP17L7P0C7H9 530 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 RALAP11233 206 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 CLCN1P35523 988 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 TKTL1P51854 596 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 KIF11P52732 1056 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 USP46P62068 366 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 ARID5AQ03989 594 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 TRIM14Q14142 442 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 TSR1Q2NL82 804 aaKnown RBP14.85□□□□□ -0.03
SSBP3-208ENST00000444533 FIGNQ5HY92 759 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 MON1AQ86VX9 555 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 YAF2Q8IY57 180 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 MAB21L3Q8N8X9 362 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 TMEM35BQ8NCS4 154 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 FEZF2Q8TBJ5 459 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 IPO4Q8TEX9 1081 aaKnown RBP14.85□□□□□ -0.03
SSBP3-208ENST00000444533 KCTD13Q8WZ19 329 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 TRIM62Q9BVG3 475 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 XPO4Q9C0E2 1151 aaKnown RBP14.85□□□□□ -0.03
SSBP3-208ENST00000444533 IL21Q9HBE4 155 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 TMEM30AQ9NV96 361 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 AJAP1Q9UKB5 411 aaPredicted RBP14.85□□□□□ -0.03
SSBP3-208ENST00000444533 PCDHGC3Q9UN70 934 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 PTPRDP23468 1912 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 NCANO14594 1321 aa14.85□□□□□ -0.03
SSBP3-208ENST00000444533 TCF20Q9UGU0 1960 aaKnown RBP14.84□□□□□ -0.03
SSBP3-208ENST00000444533 EPHB6O15197 1021 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 ZBED1O96006 694 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 PNMA6AP0CW24 399 aaPredicted RBP14.84□□□□□ -0.03
SSBP3-208ENST00000444533 LCP1P13796 627 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 HDCP19113 662 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 TUBP50607 506 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 JAM2P57087 298 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 GOLGA8FQ08AF8 430 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 GOLGA8DPQ0D2H9 430 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 ADIGQ0VDE8 80 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 HECTD3Q5T447 861 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 SFMBT2Q5VUG0 894 aa14.84□□□□□ -0.03
SSBP3-208ENST00000444533 TXNDC8Q6A555 127 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms