RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 FZD5Q13467 585 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 ZNF528Q3MIS6 628 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 MAML2Q8IZL2 1156 aaPredicted RBP9.31□□□□□ -0.92
USP6NL-203ENST00000443016 B3GALNT2Q8NCR0 500 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 CYP2S1Q96SQ9 504 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 IMPG2Q9BZV3 1241 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 ELOVL4Q9GZR5 314 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 XYLT2Q9H1B5 865 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 CHRDQ9H2X0 955 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 DPEP3Q9H4B8 488 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 EBF3Q9H4W6 596 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 DMAC2Q9NW81 257 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 TRPM5Q9NZQ8 1165 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 DCHS1Q96JQ0 3298 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 hCG_2014768A0A024R1R8 64 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 SOBPA7XYQ1 873 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 STAU1O95793 577 aaKnown RBP9.31□□□□□ -0.92
USP6NL-203ENST00000443016 FAM163BP0C2L3 166 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 USP17L7P0C7H9 530 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 KRT13P13646 458 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 HDCP19113 662 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 TRIM21P19474 475 aaKnown RBP9.31□□□□□ -0.92
USP6NL-203ENST00000443016 RPL13P26373 211 aaKnown RBP9.31□□□□□ -0.92
USP6NL-203ENST00000443016 CCR3P51677 355 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 CDH8P55286 799 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 DLG4P78352 724 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 AMPD2Q01433 879 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 MORC3Q14149 939 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 PON2Q15165 354 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 SGSM1Q2NKQ1 1148 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 ZNF658Q5TYW1 1059 aaPredicted RBP9.31□□□□□ -0.92
USP6NL-203ENST00000443016 TRIM68Q6AZZ1 485 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 TXNDC11Q6PKC3 985 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 EFCAB3Q8N7B9 438 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 MLKLQ8NB16 471 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 PLEKHO2Q8TD55 490 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 TNIP3Q96KP6 325 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 SPATA17Q96L03 361 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 SMYD3Q9H7B4 428 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 RBM12Q9NTZ6 932 aaKnown RBP9.31□□□□□ -0.92
USP6NL-203ENST00000443016 PCDHGA2Q9Y5H1 932 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 TICRRQ7Z2Z1 1910 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 CEP250Q9BV73 2442 aa9.31□□□□□ -0.92
USP6NL-203ENST00000443016 C4BPAP04003 597 aaKnown RBP9.3□□□□□ -0.92
USP6NL-203ENST00000443016 CHRNB1P11230 501 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 PIK3CAP42336 1068 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 PDE6CP51160 858 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 VAMP7P51809 220 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 CLDN10P78369 228 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 RUNX3Q13761 415 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 MTF1Q14872 753 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 SDE2Q6IQ49 451 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 ARL14EPQ8N8R7 260 aaPredicted RBP9.3□□□□□ -0.92
USP6NL-203ENST00000443016 ELMO3Q96BJ8 720 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 CEP295NLQ96MC4 621 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 SLITRK1Q96PX8 696 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 IER2Q9BTL4 223 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 MED10Q9BTT4 135 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 MMRN2Q9H8L6 949 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.3□□□□□ -0.921e-6■■■■■ 46.6
USP6NL-203ENST00000443016 ZSCAN32Q9NX65 697 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 TRAF3IP3Q9Y228 551 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 TMA7Q9Y2S6 64 aaKnown RBP9.3□□□□□ -0.92
USP6NL-203ENST00000443016 ATP8B3O60423 1300 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 C2orf78A6NCI8 922 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 IKBKBO14920 756 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 TADA3O75528 432 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 RAP1GAPP47736 663 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 CXCL12P48061 93 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 NRLP54845 237 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 MCCD1P59942 119 aaPredicted RBP9.3□□□□□ -0.92
USP6NL-203ENST00000443016 ADAM9Q13443 819 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 ZACNQ401N2 412 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 CT47A1Q5JQC4 288 aaPredicted RBP9.3□□□□□ -0.92
USP6NL-203ENST00000443016 DGKKQ5KSL6 1271 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 INTS8Q75QN2 995 aaKnown RBP9.3□□□□□ -0.92
USP6NL-203ENST00000443016 SV2AQ7L0J3 742 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 GUF1Q8N442 669 aaKnown RBP9.3□□□□□ -0.92
USP6NL-203ENST00000443016 TMC2Q8TDI7 906 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 TMEM174Q8WUU8 243 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 C8orf48Q96LL4 319 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 SLC22A12Q96S37 553 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 FAM83CQ9BQN1 747 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 FAM126AQ9BYI3 521 aaPredicted RBP9.3□□□□□ -0.92
USP6NL-203ENST00000443016 ZNF518BQ9C0D4 1074 aa9.3□□□□□ -0.92
USP6NL-203ENST00000443016 CLDN5O00501 218 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 PSMA7O14818 248 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 PSMC2P35998 433 aaKnown RBP9.29□□□□□ -0.92
USP6NL-203ENST00000443016 IFNAR2P48551 515 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 MARSP56192 900 aaKnown RBP9.29□□□□□ -0.92
USP6NL-203ENST00000443016 USP46P62068 366 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 NOP14P78316 857 aaKnown RBP9.29□□□□□ -0.92
USP6NL-203ENST00000443016 GRSF1Q12849 480 aaKnown RBP eCLIP9.29□□□□□ -0.92
USP6NL-203ENST00000443016 ZNF268Q14587 947 aaPredicted RBP9.29□□□□□ -0.92
USP6NL-203ENST00000443016 PDGFRLQ15198 375 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 FAM186BQ8IYM0 893 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 ZNF687Q8N1G0 1237 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 SPEM1Q8N4L4 309 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 CCDC150Q8NCX0 1101 aa9.29□□□□□ -0.92
USP6NL-203ENST00000443016 RUBCNQ92622 972 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms