RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 TBX3O15119 743 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 RNGTTO60942 597 aaKnown RBP5.25□□□□□ -1.57
PTPN4-206ENST00000441089 ATP9AO75110 1047 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 PSMD10O75832 226 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 STAM2O75886 525 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 C1QL1O75973 258 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 GLUD1P00367 558 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 C1RP00736 705 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 PRB1P04280 392 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 GLI1P08151 1106 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 CNPP09543 421 aaKnown RBP5.25□□□□□ -1.57
PTPN4-206ENST00000441089 PTMSP20962 102 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 NME2P22392 152 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 HOXA6P31267 233 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 ZNF76P36508 570 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 MAPK8P45983 427 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 KRTAP10-2P60368 255 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 SRSF1Q07955 248 aaKnown RBP eCLIP5.25□□□□□ -1.57
PTPN4-206ENST00000441089 TMEM62Q0P6H9 643 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 SCAPQ12770 1279 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 SRSF5Q13243 272 aaKnown RBP5.25□□□□□ -1.57
PTPN4-206ENST00000441089 ITGB3BPQ13352 177 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-206ENST00000441089 MARCH8Q5T0T0 291 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 ALG1LQ6GMV1 187 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 PARM1Q6UWI2 310 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 B3GNT9Q6UX72 402 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 NIPA1Q7RTP0 329 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 IGSF22Q8N9C0 903 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 STK35Q8TDR2 534 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 DNASE1L2Q92874 299 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 SLC5A5Q92911 643 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 IGSF21Q96ID5 467 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 INPP4AQ96PE3 977 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-206ENST00000441089 DIRC2Q96SL1 478 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 NAP1L4Q99733 375 aaKnown RBP5.25□□□□□ -1.57
PTPN4-206ENST00000441089 RPP25Q9BUL9 199 aaKnown RBP5.25□□□□□ -1.57
PTPN4-206ENST00000441089 ADAMTS10Q9H324 1103 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 PLEKHA4Q9H4M7 779 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 TTC12Q9H892 705 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-206ENST00000441089 AGO4Q9HCK5 861 aaKnown RBP5.25□□□□□ -1.57
PTPN4-206ENST00000441089 TMEM9BQ9NQ34 198 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 MRPL17Q9NRX2 175 aaKnown RBP5.25□□□□□ -1.57
PTPN4-206ENST00000441089 ZDHHC7Q9NXF8 308 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 CDH7Q9ULB5 785 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 KCNH3Q9ULD8 1083 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 NDRG2Q9UN36 371 aaKnown RBP5.25□□□□□ -1.57
PTPN4-206ENST00000441089 SSX2IPQ9Y2D8 614 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 TELO2Q9Y4R8 837 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 PTPRBP23467 1997 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 TSC2P49815 1807 aa5.25□□□□□ -1.57
PTPN4-206ENST00000441089 TLN1Q9Y490 2541 aaKnown RBP5.25□□□□□ -1.57
PTPN4-206ENST00000441089 RP1L1Q8IWN7 2480 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-206ENST00000441089 CCDC163A0A0D9SF12 145 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 SMIM35A0A1B0GVV1 85 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 GOLGA6L4A6NEF3 574 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 SHISA7A6NL88 538 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 ZC3H11AO75152 810 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTPN4-206ENST00000441089 RFPL2O75678 378 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 AKAP3O75969 853 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 ZNF202O95125 648 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 KCNA2P16389 499 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 ZSCAN20P17040 1043 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-206ENST00000441089 ARNTP27540 789 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 TCF7P36402 384 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-206ENST00000441089 LONP1P36776 959 aaKnown RBP5.24□□□□□ -1.57
PTPN4-206ENST00000441089 SYKP43405 635 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 IGBP1P78318 339 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 SETQ01105 290 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-206ENST00000441089 SATB1Q01826 763 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 FAM160A1Q05DH4 1040 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 MTMR1Q13613 665 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 LRRC32Q14392 662 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 KARSQ15046 597 aaKnown RBP5.24□□□□□ -1.57
PTPN4-206ENST00000441089 SKOR2Q2VWA4 1001 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-206ENST00000441089 LONRF3Q496Y0 759 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 CCDC183Q5T5S1 534 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 HEATR6Q6AI08 1181 aaKnown RBP5.24□□□□□ -1.57
PTPN4-206ENST00000441089 CCDC73Q6ZRK6 1079 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 KCNK18Q7Z418 384 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 WDR5BQ86VZ2 330 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 GRAMD1CQ8IYS0 662 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 ZNF843Q8N446 348 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 PDILTQ8N807 584 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 GAB3Q8WWW8 586 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 ERCC4Q92889 916 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-206ENST00000441089 DHX58Q96C10 678 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 ZNF707Q96C28 371 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-206ENST00000441089 FAM20AQ96MK3 541 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 PPP1R16BQ96T49 567 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 PLIN2Q99541 437 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 SENP7Q9BQF6 1050 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 ZNF577Q9BSK1 485 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 TRAIPQ9BWF2 469 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 PANK2Q9BZ23 570 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 CEP44Q9C0F1 390 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 CCSER1Q9C0I3 900 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 NT5C3AQ9H0P0 336 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 GZF1Q9H116 711 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-206ENST00000441089 UNC45AQ9H3U1 944 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 CLSTN2Q9H4D0 955 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms