RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 TREML2Q5T2D2 321 aa5.84□□□□□ -1.47
PFDN4-202ENST00000441080 MZT2AQ6P582 158 aa5.84□□□□□ -1.47
PFDN4-202ENST00000441080 FBXO38Q6PIJ6 1188 aa5.84□□□□□ -1.47
PFDN4-202ENST00000441080 C1orf228Q6PIY5 440 aa5.84□□□□□ -1.47
PFDN4-202ENST00000441080 CRTC1Q6UUV9 634 aa5.84□□□□□ -1.47
PFDN4-202ENST00000441080 PEG10Q86TG7 708 aaKnown RBP5.84□□□□□ -1.47
PFDN4-202ENST00000441080 AMER2Q8N7J2 671 aa5.84□□□□□ -1.47
PFDN4-202ENST00000441080 SLC9A6Q92581 669 aa5.84□□□□□ -1.47
PFDN4-202ENST00000441080 R3HDM4Q96D70 268 aa5.84□□□□□ -1.47
PFDN4-202ENST00000441080 ZNF668Q96K58 619 aaPredicted RBP5.84□□□□□ -1.47
PFDN4-202ENST00000441080 TOR3AQ9H497 397 aa5.84□□□□□ -1.47
PFDN4-202ENST00000441080 CDC23Q9UJX2 597 aa5.84□□□□□ -1.47
PFDN4-202ENST00000441080 HPSEQ9Y251 543 aa5.84□□□□□ -1.47
PFDN4-202ENST00000441080 LRCH1Q9Y2L9 728 aa5.84□□□□□ -1.47
PFDN4-202ENST00000441080 SALL3Q9BXA9 1300 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 A1L4Q6 167 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 CYR61O00622 381 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 FOXN1O15353 648 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 ORC4O43929 436 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 URI1O94763 535 aaPredicted RBP5.83□□□□□ -1.48
PFDN4-202ENST00000441080 NDST3O95803 873 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 FESP07332 822 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 IL6RP08887 468 aaPredicted RBP5.83□□□□□ -1.48
PFDN4-202ENST00000441080 HGFP14210 728 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 EPHA3P29320 983 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 UQCRC1P31930 480 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 LIPAP38571 399 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 MTHFSP49914 203 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 PGDP52209 483 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 LY6KQ17RY6 165 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 SLC9A4Q6AI14 798 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 USP17L6PQ6QN14 398 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 LDLRAD3Q86YD5 345 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 SYTL1Q8IYJ3 562 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 VPS37AQ8NEZ2 397 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 RFKQ969G6 155 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 SNX27Q96L92 541 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 C17orf80Q9BSJ5 609 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 SELENOOQ9BVL4 669 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 SCAND2PQ9GZW5 306 aaPredicted RBP5.83□□□□□ -1.48
PFDN4-202ENST00000441080 DNAJB11Q9UBS4 358 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 ING1Q9UK53 422 aaPredicted RBP5.83□□□□□ -1.48
PFDN4-202ENST00000441080 PACSIN3Q9UKS6 424 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 USP22Q9UPT9 525 aa5.83□□□□□ -1.48
PFDN4-202ENST00000441080 FAM234BA2RU67 622 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 CCDC151A5D8V7 595 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 RAMP2O60895 175 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 VNN1O95497 513 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 ONECUT2O95948 504 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 LDHAP00338 332 aaKnown RBP5.82□□□□□ -1.48
PFDN4-202ENST00000441080 GCP02774 474 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 GABRB3P28472 473 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 ATICP31939 592 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 PLA2G5P39877 138 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 GRIA3P42263 894 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 TECP42680 631 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 ALDH9A1P49189 494 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 STARD3Q14849 445 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 PLAC9Q5JTB6 97 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 MANEALQ5VSG8 457 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 MRGPRGQ86SM5 289 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 CAND1Q86VP6 1230 aaKnown RBP5.82□□□□□ -1.48
PFDN4-202ENST00000441080 XAGE5Q8WWM1 108 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 SOCS4Q8WXH5 440 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 ZBTB45Q96K62 511 aaPredicted RBP5.82□□□□□ -1.48
PFDN4-202ENST00000441080 ZCWPW1Q9H0M4 648 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 SLC25A32Q9H2D1 315 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 ARHGEF3Q9NR81 526 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 SH2B3Q9UQQ2 575 aa5.82□□□□□ -1.48
PFDN4-202ENST00000441080 ZAR1LA6NP61 321 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 PODXLO00592 558 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 HNRNPDLO14979 420 aaKnown RBP5.81□□□□□ -1.48
PFDN4-202ENST00000441080 ADAMTS3O15072 1205 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 KCNQ3O43525 872 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 PLA2G6O60733 806 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 TTLL1O95922 423 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 IL6STP40189 918 aaPredicted RBP5.81□□□□□ -1.48
PFDN4-202ENST00000441080 PDE1AP54750 535 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 INHBCP55103 352 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 TIAL1Q01085 375 aaKnown RBP eCLIP5.81□□□□□ -1.48
PFDN4-202ENST00000441080 TNFAIP2Q03169 654 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 GRM1Q13255 1194 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 ZNF169Q14929 603 aaPredicted RBP5.81□□□□□ -1.48
PFDN4-202ENST00000441080 FAXCQ5TGI0 409 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 MRNIPQ6NTE8 343 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 ZNF551Q7Z340 670 aaPredicted RBP5.81□□□□□ -1.48
PFDN4-202ENST00000441080 LRRC71Q8N4P6 559 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 GLIS1Q8NBF1 620 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 SLC16A11Q8NCK7 471 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 CYP2W1Q8TAV3 490 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 TMEM41AQ96HV5 264 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 PDLIM2Q96JY6 352 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 FAM227BQ96M60 508 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 HIST1H2AAQ96QV6 131 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 GDF15Q99988 308 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 VN1R3Q9BXE9 311 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 STK33Q9BYT3 514 aa5.81□□□□□ -1.48
PFDN4-202ENST00000441080 INO80BQ9C086 356 aaPredicted RBP5.81□□□□□ -1.48
PFDN4-202ENST00000441080 WDR12Q9GZL7 423 aaKnown RBP5.81□□□□□ -1.48
PFDN4-202ENST00000441080 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms