RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 ACAP3Q96P50 834 aa14.29□□□□□ -0.12
LINC02048-201ENST00000440556 FRMD8P1Q9BZ68 369 aaPredicted RBP14.29□□□□□ -0.12
LINC02048-201ENST00000440556 UNKQ9C0B0 810 aaKnown RBP14.29□□□□□ -0.12
LINC02048-201ENST00000440556 DHX33Q9H6R0 707 aaKnown RBP14.29□□□□□ -0.12
LINC02048-201ENST00000440556 PSTPIP2Q9H939 334 aa14.29□□□□□ -0.12
LINC02048-201ENST00000440556 PARVGQ9HBI0 331 aa14.29□□□□□ -0.12
LINC02048-201ENST00000440556 ALG13Q9NP73 1137 aaKnown RBP14.29□□□□□ -0.12
LINC02048-201ENST00000440556 KCND2Q9NZV8 630 aa14.29□□□□□ -0.12
LINC02048-201ENST00000440556 SIRPGQ9P1W8 387 aa14.29□□□□□ -0.12
LINC02048-201ENST00000440556 EMSYQ7Z589 1322 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 C2orf71A6NGG8 1288 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 C6orf222P0C671 652 aaPredicted RBP14.28□□□□□ -0.12
LINC02048-201ENST00000440556 CYP11B1P15538 503 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 GLRA2P23416 452 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 CYP2J2P51589 502 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 PPP4CP60510 307 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 PSMC6P62333 389 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 TMPRSS15P98073 1019 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 PTK7Q13308 1070 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 UBE2SQ16763 222 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 HSF5Q4G112 596 aaPredicted RBP14.28□□□□□ -0.12
LINC02048-201ENST00000440556 NSMFQ6X4W1 530 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 ARCQ7LC44 396 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 TICAM1Q8IUC6 712 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 WDR75Q8IWA0 830 aaKnown RBP14.28□□□□□ -0.12
LINC02048-201ENST00000440556 CNBD2Q96M20 576 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 HEMGNQ9BXL5 484 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 SLC2A11Q9BYW1 496 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 SMYD3Q9H7B4 428 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 SELENONQ9NZV5 590 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 CDH7Q9ULB5 785 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 SNCAIPQ9Y6H5 919 aa14.28□□□□□ -0.12
LINC02048-201ENST00000440556 LOXHD1Q8IVV2 1947 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 ZNFX1Q9P2E3 1918 aaKnown RBP14.27□□□□□ -0.12
LINC02048-201ENST00000440556 USP17L5A8MUK1 530 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 ONECUT3O60422 494 aaPredicted RBP14.27□□□□□ -0.12
LINC02048-201ENST00000440556 SNNO75324 88 aaPredicted RBP14.27□□□□□ -0.12
LINC02048-201ENST00000440556 BMP10O95393 424 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 THRAP10827 490 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 PTPN7P35236 360 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 VAMP7P51809 220 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 MCCD1P59942 119 aaPredicted RBP14.27□□□□□ -0.12
LINC02048-201ENST00000440556 ESRRGP62508 458 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 SLC25A3Q00325 362 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 KCNA1Q09470 495 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 BST1Q10588 318 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 ITGA7Q13683 1181 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 ADGRE1Q14246 886 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 NDUFA5Q16718 116 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 DEPDC1Q5TB30 811 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 RINT1Q6NUQ1 792 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 NEPROQ6NW34 567 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 DCDC5Q6ZRR9 648 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 ZNF720Q7Z2F6 126 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 ZNF677Q86XU0 584 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 DZIP1Q86YF9 867 aaKnown RBP14.27□□□□□ -0.12
LINC02048-201ENST00000440556 RIN3Q8TB24 985 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 HM13Q8TCT9 377 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 NKD2Q969F2 451 aaPredicted RBP14.27□□□□□ -0.12
LINC02048-201ENST00000440556 SERPINI1Q99574 410 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 CHORDC1Q9UHD1 332 aaPredicted RBP14.27□□□□□ -0.12
LINC02048-201ENST00000440556 GNPTGQ9UJJ9 305 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 APOBEC2Q9Y235 224 aaKnown RBP14.27□□□□□ -0.12
LINC02048-201ENST00000440556 ZNF652Q9Y2D9 606 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 TSC22D4Q9Y3Q8 395 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 FARP1Q9Y4F1 1045 aaPredicted RBP14.27□□□□□ -0.12
LINC02048-201ENST00000440556 NUB1Q9Y5A7 615 aa14.27□□□□□ -0.12
LINC02048-201ENST00000440556 SNED1Q8TER0 1413 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 GOLGA8RI6L899 631 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 KCNQ2O43526 872 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 INHBAP08476 426 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 SNHG28P0DPA3 235 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 RBP3P10745 1247 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 CDK8P49336 464 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 EPHB1P54762 984 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 AP3B2Q13367 1082 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 ALCAMQ13740 583 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 MDH1BQ5I0G3 518 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 TTC39BQ5VTQ0 682 aaPredicted RBP14.27□□□□□ -0.13
LINC02048-201ENST00000440556 ZNF772Q68DY9 489 aaPredicted RBP14.27□□□□□ -0.13
LINC02048-201ENST00000440556 IYDQ6PHW0 289 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 CAPN12Q6ZSI9 719 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 C12orf56Q8IXR9 622 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 MCOLN2Q8IZK6 566 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 CHPT1Q8WUD6 406 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 SLC44A1Q8WWI5 657 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 ZMAT2Q96NC0 199 aaKnown RBP14.27□□□□□ -0.13
LINC02048-201ENST00000440556 MRPL47Q9HD33 250 aaKnown RBP14.27□□□□□ -0.13
LINC02048-201ENST00000440556 THAP1Q9NVV9 213 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 EPS15L1Q9UBC2 864 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 HERC5Q9UII4 1024 aaKnown RBP14.27□□□□□ -0.13
LINC02048-201ENST00000440556 APPL1Q9UKG1 709 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 PRPF19Q9UMS4 504 aaKnown RBP14.27□□□□□ -0.13
LINC02048-201ENST00000440556 GNEQ9Y223 722 aaKnown RBP14.27□□□□□ -0.13
LINC02048-201ENST00000440556 PLLPQ9Y342 182 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 TRIM17Q9Y577 477 aa14.27□□□□□ -0.13
LINC02048-201ENST00000440556 LDHCP07864 332 aa14.26□□□□□ -0.13
LINC02048-201ENST00000440556 GSTT2P0CG29 244 aa14.26□□□□□ -0.13
LINC02048-201ENST00000440556 GSTT2BP0CG30 244 aa14.26□□□□□ -0.13
LINC02048-201ENST00000440556 PSMC3P17980 439 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms